FFCP PHASE1:Hg19::chr12:862256..862343,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:862256..862343,+
|short_description=p2@WNK1
|description=CAGE_peak_2_at_WNK1_5end
|association_with_transcript=31bp_to_ENST00000252477,uc001qin.2,uc001qio...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=65125 | |EntrezGene=65125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14540 | |HGNC=14540 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H4A3 | |UniProt=Q9H4A3 | ||
|association_with_transcript=31bp_to_ENST00000252477,uc001qin.2,uc001qio.3,uc001qip.3_5end | |||
|cluster_id=chr12:862256..862343,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_WNK1_5end | |||
|id=chr12:862256..862343,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.58e-24!76;CL:0000839!7.08e-22!70;CL:0002009!1.68e-20!65;CL:0002057!2.24e-20!42;CL:0000557!2.71e-20!71;CL:0002194!7.07e-20!63;CL:0000576!7.07e-20!63;CL:0000040!7.07e-20!63;CL:0000559!7.07e-20!63;CL:0000860!2.20e-19!45;CL:0000738!2.79e-12!140;CL:0002031!7.13e-11!124;CL:0000763!1.75e-10!112;CL:0000049!1.75e-10!112;CL:0002087!3.04e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.26e-19;33!CL:0002057;5.26e-19;33!CL:0000473;4.31e-18;39!CL:0000234;4.31e-18;39!CL:0000576;3.22e-15;48!CL:0000766;1.32e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.35e-30,72;CL:0000839,5.86e-28,66;CL:0000473,1.41e-26,48;CL:0000234,1.41e-26,48;CL:0002009,2.45e-26,61;CL:0000557,2.46e-26,67;CL:0002194,1.36e-25,59;CL:0000576,1.36e-25,59;CL:0000040,1.36e-25,59;CL:0000559,1.36e-25,59;CL:0000860,5.03e-24,42;CL:0002057,5.03e-24,42;CL:0000763,1.23e-16,108;CL:0000049,1.23e-16,108;CL:0000738,3.80e-15,136;CL:0002031,1.09e-12,120;CL:0002087,8.27e-11,115;CL:0002032,2.30e-08,161;CL:0000837,2.30e-08,161;CL:0000037,3.27e-08,168;CL:0000988,2.38e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.90e-33!115;UBERON:0002193!9.55e-23!112;UBERON:0002390!1.07e-22!102;UBERON:0003061!1.07e-22!102;UBERON:0002371!5.15e-16!80;UBERON:0001474!3.47e-13!86;UBERON:0002405!5.01e-13!115;UBERON:0001049!2.02e-10!57;UBERON:0005068!2.02e-10!57;UBERON:0006241!2.02e-10!57;UBERON:0007135!2.02e-10!57;UBERON:0000062!3.90e-10!511;UBERON:0004765!4.73e-10!101;UBERON:0001434!4.73e-10!101;UBERON:0002616!5.89e-09!59;UBERON:0000178!3.94e-08!15;UBERON:0000179!3.94e-08!15;UBERON:0000463!3.94e-08!15;UBERON:0003080!5.77e-08!42;UBERON:0002780!1.45e-07!41;UBERON:0001890!1.45e-07!41;UBERON:0006240!1.45e-07!41;UBERON:0001017!2.28e-07!82;UBERON:0000955!2.48e-07!69;UBERON:0006238!2.48e-07!69;UBERON:0005743!3.56e-07!86;UBERON:0002020!5.30e-07!34;UBERON:0003528!5.30e-07!34;UBERON:0001893!5.35e-07!34;UBERON:0003075!6.10e-07!86;UBERON:0007284!6.10e-07!86;UBERON:0000468!7.41e-07!659;UBERON:0000480!8.32e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.42e-10;114!UBERON:0000178;1.05e-09;15!UBERON:0000179;1.05e-09;15!UBERON:0000463;1.05e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.70e-38,114;UBERON:0002390,3.39e-29,98;UBERON:0003061,3.39e-29,98;UBERON:0002193,5.84e-29,108;UBERON:0002371,1.10e-21,76;UBERON:0002405,3.15e-21,93;UBERON:0001474,4.28e-18,82;UBERON:0004765,8.17e-15,90;UBERON:0001434,4.06e-12,100;UBERON:0001049,1.90e-09,56;UBERON:0005068,1.90e-09,56;UBERON:0006241,1.90e-09,56;UBERON:0007135,1.90e-09,56;UBERON:0000178,2.10e-09,15;UBERON:0000179,2.10e-09,15;UBERON:0000463,2.10e-09,15;UBERON:0003081,8.94e-09,203;UBERON:0000073,3.48e-08,53;UBERON:0002616,3.48e-08,53;UBERON:0002050,2.61e-07,564;UBERON:0000923,3.11e-07,560;UBERON:0010316,3.11e-07,560;UBERON:0005291,3.11e-07,560;UBERON:0006598,3.11e-07,560;UBERON:0010317,3.11e-07,560;UBERON:0002532,3.11e-07,560 | |||
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| ||
|short_description=p2@WNK1 | |||
}} | }} |
Latest revision as of 04:17, 25 September 2015
Short description: | p2@WNK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WNK1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 31bp_to_ENST00000252477, uc001qin.2, uc001qio.3, uc001qip.3_5end |
EntrezGene: | WNK1 |
HGNC: | 14540 |
UniProt: | Q9H4A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.35e-30 | 72 |
myeloid lineage restricted progenitor cell | 5.86e-28 | 66 |
defensive cell | 1.41e-26 | 48 |
phagocyte | 1.41e-26 | 48 |
macrophage dendritic cell progenitor | 2.45e-26 | 61 |
granulocyte monocyte progenitor cell | 2.46e-26 | 67 |
monopoietic cell | 1.36e-25 | 59 |
monocyte | 1.36e-25 | 59 |
monoblast | 1.36e-25 | 59 |
promonocyte | 1.36e-25 | 59 |
classical monocyte | 5.03e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.03e-24 | 42 |
myeloid cell | 1.23e-16 | 108 |
common myeloid progenitor | 1.23e-16 | 108 |
leukocyte | 3.80e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.09e-12 | 120 |
nongranular leukocyte | 8.27e-11 | 115 |
hematopoietic oligopotent progenitor cell | 2.30e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.30e-08 | 161 |
hematopoietic stem cell | 3.27e-08 | 168 |
hematopoietic cell | 2.38e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.70e-38 | 114 |
hematopoietic system | 3.39e-29 | 98 |
blood island | 3.39e-29 | 98 |
hemolymphoid system | 5.84e-29 | 108 |
bone marrow | 1.10e-21 | 76 |
immune system | 3.15e-21 | 93 |
bone element | 4.28e-18 | 82 |
skeletal element | 8.17e-15 | 90 |
skeletal system | 4.06e-12 | 100 |
neural tube | 1.90e-09 | 56 |
neural rod | 1.90e-09 | 56 |
future spinal cord | 1.90e-09 | 56 |
neural keel | 1.90e-09 | 56 |
blood | 2.10e-09 | 15 |
haemolymphatic fluid | 2.10e-09 | 15 |
organism substance | 2.10e-09 | 15 |
lateral plate mesoderm | 8.94e-09 | 203 |
regional part of nervous system | 3.48e-08 | 53 |
regional part of brain | 3.48e-08 | 53 |
embryonic structure | 2.61e-07 | 564 |
germ layer | 3.11e-07 | 560 |
germ layer / neural crest | 3.11e-07 | 560 |
embryonic tissue | 3.11e-07 | 560 |
presumptive structure | 3.11e-07 | 560 |
germ layer / neural crest derived structure | 3.11e-07 | 560 |
epiblast (generic) | 3.11e-07 | 560 |