FFCP PHASE1:Hg19::chr1:36590804..36590835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1296 | |EntrezGene=1296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2216 | |HGNC=2216 | ||
|TSSclassifier=strong | |||
|UniProt=P25067 | |UniProt=P25067 | ||
|association_with_transcript=0bp_to_ENST00000397799_5end | |association_with_transcript=0bp_to_ENST00000397799_5end | ||
|cluster_id=chr1:36590804..36590835,- | |||
|coexpression_cluster_id=C3977 | |||
|description=CAGE_peak_1_at_COL8A2_5end | |description=CAGE_peak_1_at_COL8A2_5end | ||
|id=chr1:36590804..36590835,- | |id=chr1:36590804..36590835,- | ||
|ontology_enrichment_celltype=CL:0000057!1.61e-09!75 | |ontology_enrichment_celltype=CL:0000057!1.61e-09!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.90e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.54e-10!115;UBERON:0000468!6.63e-08!659;UBERON:0000062!7.75e-08!511;UBERON:0003076!2.61e-07!15;UBERON:0003057!2.61e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;2.23e-07;12!UBERON:0002028;2.23e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,4.54e-10,15;UBERON:0003057,4.54e-10,15;UBERON:0004733,1.20e-07,12;UBERON:0002028,1.20e-07,12;UBERON:0007277,1.20e-07,12;UBERON:0007023,6.94e-07,114;UBERON:0004732,7.26e-07,13 | |||
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| ||
|short_description=p1@COL8A2 | |short_description=p1@COL8A2 | ||
}} | }} |
Latest revision as of 20:17, 17 September 2015
Short description: | p1@COL8A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL8A2_5end |
Coexpression cluster: | C3977_Osteoblast_Chondrocyte_Hair_Macrophage_osteosarcoma_retina_immature |
Association with transcript: | 0bp_to_ENST00000397799_5end |
EntrezGene: | COL8A2 |
HGNC: | 2216 |
UniProt: | P25067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.90e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 4.54e-10 | 15 |
chordal neural plate | 4.54e-10 | 15 |
segmental subdivision of hindbrain | 1.20e-07 | 12 |
hindbrain | 1.20e-07 | 12 |
presumptive hindbrain | 1.20e-07 | 12 |
adult organism | 6.94e-07 | 114 |
segmental subdivision of nervous system | 7.26e-07 | 13 |