FFCP PHASE1:Hg19::chr1:3607263..3607274,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7161 | |EntrezGene=7161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12003 | |HGNC=12003 | ||
|TSSclassifier=strong | |||
|UniProt=O15350 | |UniProt=O15350 | ||
|association_with_transcript=27bp_to_ENST00000378280,ENST00000378285,ENST00000378288,NM_001126240,NM_001126241,NM_001126242,NM_001204189,NM_001204190,NM_001204191,uc001akr.2,uc001aks.2,uc009vlk.1,uc010nzj.1_5end | |association_with_transcript=27bp_to_ENST00000378280,ENST00000378285,ENST00000378288,NM_001126240,NM_001126241,NM_001126242,NM_001204189,NM_001204190,NM_001204191,uc001akr.2,uc001aks.2,uc009vlk.1,uc010nzj.1_5end | ||
|cluster_id=chr1:3607263..3607274,+ | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_12_at_TP73_5end | |description=CAGE_peak_12_at_TP73_5end | ||
|id=chr1:3607263..3607274,+ | |id=chr1:3607263..3607274,+ | ||
|ontology_enrichment_celltype=CL:0002623!1.62e-07!3 | |ontology_enrichment_celltype=CL:0002623!1.62e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.32e-26;2!CL:0000242;4.32e-26;2!CL:0002623;9.45e-18;3!CL:0000095;1.63e-11;17!CL:0000312;2.66e-11;5!CL:0000622;3.26e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000154;1.44e-09;6!CL:0002319;2.06e-08;25!CL:0000362;7.48e-07;9!CL:0000150;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.32e-26,2;CL:0002623,1.12e-17,3;CL:0000095,1.63e-11,17;CL:0000123,1.63e-11,17;CL:0000312,2.66e-11,5;CL:0000622,3.60e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000154,1.57e-09,6;CL:0002319,2.06e-08,25;CL:0000362,7.48e-07,9;CL:0000150,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.63e-19;10!CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.02e-14!129;UBERON:0007811!1.02e-14!129;UBERON:0001896!2.21e-14!3;UBERON:0005290!2.21e-14!3;UBERON:0010096!2.21e-14!3;UBERON:0002298!2.66e-14!8;UBERON:0000955!5.46e-13!69;UBERON:0006238!5.46e-13!69;UBERON:0007023!1.55e-12!115;UBERON:0000033!1.83e-11!123;UBERON:0000974!2.42e-11!10;UBERON:0001049!1.90e-10!57;UBERON:0005068!1.90e-10!57;UBERON:0006241!1.90e-10!57;UBERON:0007135!1.90e-10!57;UBERON:0001017!1.96e-10!82;UBERON:0002148!2.21e-10!2;UBERON:0009662!2.21e-10!2;UBERON:0000341!3.06e-10!2;UBERON:0002616!5.21e-10!59;UBERON:0005743!8.39e-10!86;UBERON:0000924!1.05e-09!173;UBERON:0006601!1.05e-09!173;UBERON:0004733!1.90e-09!12;UBERON:0002028!1.90e-09!12;UBERON:0007277!1.90e-09!12;UBERON:0004121!5.25e-09!169;UBERON:0003729!6.34e-09!5;UBERON:0004732!1.07e-08!13;UBERON:0000073!1.42e-08!94;UBERON:0001016!1.42e-08!94;UBERON:0000349!1.58e-08!5;UBERON:0002308!2.64e-08!9;UBERON:0000125!2.64e-08!9;UBERON:0003076!1.69e-07!15;UBERON:0003057!1.69e-07!15;UBERON:0000988!3.44e-07!3;UBERON:0006331!3.44e-07!3;UBERON:0002346!8.46e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.44e-09;6!UBERON:0003293;1.44e-09;6!UBERON:0003294;1.44e-09;6!UBERON:0010047;1.44e-09;6!UBERON:0003408;1.44e-09;6!UBERON:0000167;1.44e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.57e-09,6;UBERON:0003293,1.57e-09,6;UBERON:0003294,1.57e-09,6;UBERON:0010047,1.57e-09,6;UBERON:0000167,1.57e-09,6 | |||
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| ||
|short_description=p12@TP73 | |short_description=p12@TP73 | ||
}} | }} |
Latest revision as of 19:33, 17 September 2015
Short description: | p12@TP73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TP73_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 27bp_to_ENST00000378280, ENST00000378285, ENST00000378288, NM_001126240, NM_001126241, NM_001126242, NM_001204189, NM_001204190, NM_001204191, uc001akr.2, uc001aks.2, uc009vlk.1, uc010nzj.1_5end |
EntrezGene: | TP73 |
HGNC: | 12003 |
UniProt: | O15350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.32e-26 | 2 |
acinar cell of salivary gland | 1.12e-17 | 3 |
neuron associated cell | 1.63e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.63e-11 | 17 |
keratinocyte | 2.66e-11 | 5 |
acinar cell | 3.60e-11 | 5 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
protein secreting cell | 1.57e-09 | 6 |
neural cell | 2.06e-08 | 25 |
epidermal cell | 7.48e-07 | 9 |
glandular epithelial cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.57e-09 | 6 |
gland of oral region | 1.57e-09 | 6 |
gland of foregut | 1.57e-09 | 6 |
oral gland | 1.57e-09 | 6 |
oral cavity | 1.57e-09 | 6 |