FFCP PHASE1:Hg19::chr5:34728676..34728679,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26064 | |EntrezGene=26064 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14873 | |HGNC=14873 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000509247_5end | |association_with_transcript=0bp_to_ENST00000509247_5end | ||
|cluster_id=chr5:34728676..34728679,+ | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_26_at_RAI14_5end | |description=CAGE_peak_26_at_RAI14_5end | ||
|id=chr5:34728676..34728679,+ | |id=chr5:34728676..34728679,+ | ||
|ontology_enrichment_celltype=CL:0000064!3.11e-15!3;CL:0005012!3.11e-15!3;CL:0000067!3.11e-15!3;CL:0002304!3.11e-15!3;CL:0000159!5.26e-11!2;CL:0000066!3.33e-09!254;CL:0000319!9.91e-07!1 | |ontology_enrichment_celltype=CL:0000064!3.11e-15!3;CL:0005012!3.11e-15!3;CL:0000067!3.11e-15!3;CL:0002304!3.11e-15!3;CL:0000159!5.26e-11!2;CL:0000066!3.33e-09!254;CL:0000319!9.91e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000319;6.62e-41;1!CL:0000342;1.21e-40;1!CL:0002565;1.21e-40;1!CL:0000159;3.11e-21;2!CL:0002149;6.13e-08;6!CL:0002255;6.13e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,6.62e-41,1;CL:0000342,1.48e-40,1;CL:0002565,1.48e-40,1;CL:0000159,3.11e-21,2;CL:0002149,5.92e-08,6;CL:0002255,5.92e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!4.54e-09!25;DOID:120!5.05e-08!27;DOID:193!2.09e-07!29;DOID:3030!9.91e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3030;6.62e-41;1!DOID:4468;5.70e-21;2!DOID:299;4.29e-15;25!DOID:3001;6.13e-08;6!DOID:120;7.13e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.62e-41,1;DOID:4468,5.70e-21,2;DOID:299,4.19e-15,25;DOID:3001,5.92e-08,6;DOID:120,7.03e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000488!3.37e-20!4;UBERON:0001778!3.11e-15!3;UBERON:0001775!3.11e-15!3;UBERON:0002203!1.61e-13!6;UBERON:0001768!1.61e-13!6;UBERON:0007625!4.00e-11!11;UBERON:0003729!5.43e-09!5;UBERON:0001801!1.11e-08!14;UBERON:0002200!2.07e-07!11;UBERON:0006876!2.07e-07!11;UBERON:0002294!3.33e-07!7;UBERON:0001173!3.33e-07!7;UBERON:0004912!3.33e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;1.21e-40;1!UBERON:0001769;1.21e-40;1!UBERON:0000488;2.94e-11;4!UBERON:0002203;6.13e-08;6!UBERON:0001768;6.13e-08;6!UBERON:0002200;6.13e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,1.48e-40,1;UBERON:0001769,1.48e-40,1;UBERON:0000488,3.10e-11,4;UBERON:0002203,6.34e-08,6;UBERON:0001768,6.34e-08,6;UBERON:0002200,6.34e-08,6 | |||
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|short_description=p26@RAI14 | |short_description=p26@RAI14 | ||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p26@RAI14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_RAI14_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 0bp_to_ENST00000509247_5end |
EntrezGene: | RAI14 |
HGNC: | 14873 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 6.62e-41 | 1 |
pigment cell (sensu Vertebrata) | 1.48e-40 | 1 |
iris pigment epithelial cell | 1.48e-40 | 1 |
seromucus secreting cell | 3.11e-21 | 2 |
epithelial cell of uterus | 5.92e-08 | 6 |
stromal cell of endometrium | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 1.48e-40 | 1 |
iris | 1.48e-40 | 1 |
atypical epithelium | 3.10e-11 | 4 |
vasculature of eye | 6.34e-08 | 6 |
uvea | 6.34e-08 | 6 |
vasculature of head | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.62e-41 | 1 |
clear cell adenocarcinoma | 5.70e-21 | 2 |
adenocarcinoma | 4.19e-15 | 25 |
female reproductive endometrioid cancer | 5.92e-08 | 6 |
female reproductive organ cancer | 7.03e-07 | 27 |