FFCP PHASE1:Hg19::chr12:78359680..78359686,+: Difference between revisions
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|id=chr12:78359680..78359686,+
|short_description=p32@NAV3
|description=CAGE_peak_32_at_NAV3_5end
|association_with_transcript=-369bp_to_ENST00000547725,ENST0000055...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89795 | |EntrezGene=89795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15998 | |HGNC=15998 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-369bp_to_ENST00000547725,ENST00000550503_5end | |||
|cluster_id=chr12:78359680..78359686,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_32_at_NAV3_5end | |||
|id=chr12:78359680..78359686,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.39e-66;1!UBERON:0003056;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p32@NAV3 | |||
}} | }} |
Latest revision as of 22:39, 24 September 2015
Short description: | p32@NAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_NAV3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -369bp_to_ENST00000547725, ENST00000550503_5end |
EntrezGene: | NAV3 |
HGNC: | 15998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 4.61e-131 | 2 |
neuron projection bundle | 4.61e-131 | 2 |
corpus callosum | 1.23e-66 | 1 |
central nervous system cell part cluster | 1.23e-66 | 1 |
axon tract | 1.23e-66 | 1 |
intercerebral commissure | 1.23e-66 | 1 |
dorsal telencephalic commissure | 1.23e-66 | 1 |
brain white matter | 1.23e-66 | 1 |
brain commissure | 1.23e-66 | 1 |
white matter | 1.23e-66 | 1 |
nervous system commissure | 1.23e-66 | 1 |
cerebral hemisphere white matter | 1.23e-66 | 1 |
cranial nerve II | 2.39e-66 | 1 |
cranial nerve | 2.39e-66 | 1 |
nerve trunk | 2.39e-66 | 1 |
nerve connecting eye with brain | 2.39e-66 | 1 |
nerve | 2.39e-66 | 1 |
retinal neural layer | 2.39e-66 | 1 |
presumptive neural retina | 2.39e-66 | 1 |
neural tissue | 5.04e-34 | 2 |
layer of retina | 8.69e-18 | 4 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
peripheral nervous system | 1.12e-08 | 8 |