FFCP PHASE1:Hg19::chr1:29063491..29063511,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51441 | |EntrezGene=51441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31675 | |HGNC=31675 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000496288_5end | |association_with_transcript=14bp_to_ENST00000496288_5end | ||
|cluster_id=chr1:29063491..29063511,+ | |||
|description=CAGE_peak_2_at_YTHDF2_5end | |description=CAGE_peak_2_at_YTHDF2_5end | ||
|id=chr1:29063491..29063511,+ | |id=chr1:29063491..29063511,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.26e-19!53;CL:0000051!1.26e-19!53;CL:0000838!2.28e-19!52;CL:0000084!1.86e-10!25;CL:0000827!1.86e-10!25;CL:0000945!1.08e-08!24;CL:0000826!1.08e-08!24;CL:0000988!6.61e-08!182;CL:0000791!1.72e-07!18;CL:0000789!1.72e-07!18;CL:0002420!1.72e-07!18;CL:0002419!1.72e-07!18;CL:0000790!1.72e-07!18;CL:0000037!1.78e-07!172;CL:0000566!1.78e-07!172 | |ontology_enrichment_celltype=CL:0000542!1.26e-19!53;CL:0000051!1.26e-19!53;CL:0000838!2.28e-19!52;CL:0000084!1.86e-10!25;CL:0000827!1.86e-10!25;CL:0000945!1.08e-08!24;CL:0000826!1.08e-08!24;CL:0000988!6.61e-08!182;CL:0000791!1.72e-07!18;CL:0000789!1.72e-07!18;CL:0002420!1.72e-07!18;CL:0002419!1.72e-07!18;CL:0000790!1.72e-07!18;CL:0000037!1.78e-07!172;CL:0000566!1.78e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.73e-11;53!CL:0000084;1.46e-10;25!CL:0000945;1.30e-08;24!CL:0000791;1.94e-07;18!CL:0000789;1.94e-07;18!CL:0002419;1.94e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.26e-19,53;CL:0000051,1.26e-19,53;CL:0000838,2.28e-19,52;CL:0000084,1.86e-10,25;CL:0000827,1.86e-10,25;CL:0000945,1.08e-08,24;CL:0000826,1.08e-08,24;CL:0000988,1.04e-07,177;CL:0000791,1.72e-07,18;CL:0000789,1.72e-07,18;CL:0002420,1.72e-07,18;CL:0002419,1.72e-07,18;CL:0000790,1.72e-07,18;CL:0000037,2.06e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;2.73e-11;53!CL:0000790;1.94e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!7.94e-11!51;DOID:0060083!7.94e-11!51;DOID:1240!1.24e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;5.72e-07;51!DOID:0060083;5.72e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.94e-11,51;DOID:0060083,7.94e-11,51;DOID:1240,1.24e-07,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@YTHDF2 | |short_description=p2@YTHDF2 | ||
}} | }} |
Latest revision as of 11:00, 17 September 2015
Short description: | p2@YTHDF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_YTHDF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000496288_5end |
EntrezGene: | YTHDF2 |
HGNC: | 31675 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.26e-19 | 53 |
common lymphoid progenitor | 1.26e-19 | 53 |
lymphoid lineage restricted progenitor cell | 2.28e-19 | 52 |
T cell | 1.86e-10 | 25 |
pro-T cell | 1.86e-10 | 25 |
lymphocyte of B lineage | 1.08e-08 | 24 |
pro-B cell | 1.08e-08 | 24 |
hematopoietic cell | 1.04e-07 | 177 |
mature alpha-beta T cell | 1.72e-07 | 18 |
alpha-beta T cell | 1.72e-07 | 18 |
immature T cell | 1.72e-07 | 18 |
mature T cell | 1.72e-07 | 18 |
immature alpha-beta T cell | 1.72e-07 | 18 |
hematopoietic stem cell | 2.06e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.94e-11 | 51 |
immune system cancer | 7.94e-11 | 51 |
leukemia | 1.24e-07 | 39 |