FFCP PHASE1:Hg19::chr5:172839446..172839454,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:172839446..172839454,+ | |||
|coexpression_cluster_id=C322 | |||
|description=CAGE_peak_at_chr5:172839446..172839454,+ | |description=CAGE_peak_at_chr5:172839446..172839454,+ | ||
|id=chr5:172839446..172839454,+ | |id=chr5:172839446..172839454,+ | ||
|ontology_enrichment_celltype=CL:0000159!5.86e-09!2 | |ontology_enrichment_celltype=CL:0000159!5.86e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000319;5.16e-21;1!CL:0000159;3.34e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.82e-21,1;CL:0000159,2.47e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.28e-17;5!UBERON:0006965;3.34e-11;2 | |||
|ontology_enrichment_disease=DOID:4468!5.01e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3030;5.16e-21;1!DOID:4468;3.34e-11;2!DOID:299;9.68e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.82e-21,1;DOID:4468,4.52e-11,2;DOID:299,9.68e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.07e-17!115;UBERON:0002046!5.26e-13!5;UBERON:0004117!5.26e-13!5;UBERON:0007689!5.26e-13!5;UBERON:0007123!5.26e-13!5;UBERON:0003091!5.26e-13!5;UBERON:0001049!6.34e-13!57;UBERON:0005068!6.34e-13!57;UBERON:0006241!6.34e-13!57;UBERON:0007135!6.34e-13!57;UBERON:0001896!6.91e-12!3;UBERON:0005290!6.91e-12!3;UBERON:0010096!6.91e-12!3;UBERON:0003076!1.76e-11!15;UBERON:0003057!1.76e-11!15;UBERON:0002616!3.53e-09!59;UBERON:0001017!5.80e-09!82;UBERON:0003075!1.50e-08!86;UBERON:0007284!1.50e-08!86;UBERON:0005743!2.20e-08!86;UBERON:0002346!5.21e-08!90;UBERON:0002298!8.77e-08!8;UBERON:0004733!1.25e-07!12;UBERON:0002028!1.25e-07!12;UBERON:0007277!1.25e-07!12;UBERON:0000955!2.69e-07!69;UBERON:0006238!2.69e-07!69;UBERON:0000073!2.90e-07!94;UBERON:0001016!2.90e-07!94;UBERON:0002020!2.95e-07!34;UBERON:0003528!2.95e-07!34;UBERON:0004732!5.11e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.28e-17;5!UBERON:0000341;2.02e-11;2!UBERON:0003127;3.34e-11;2!UBERON:0001896;6.78e-08;3!UBERON:0005290;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.28e-17,5;UBERON:0004117,4.28e-17,5;UBERON:0007689,4.28e-17,5;UBERON:0007123,4.28e-17,5;UBERON:0003091,4.28e-17,5;UBERON:0000341,2.02e-11,2;UBERON:0003127,3.02e-11,2;UBERON:0009722,2.72e-08,11;UBERON:0007690,2.72e-08,11;UBERON:0001896,7.26e-08,3;UBERON:0005290,7.26e-08,3;UBERON:0010096,7.26e-08,3 | |||
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| ||
|short_description=p@chr5:172839446..172839454,+ | |short_description=p@chr5:172839446..172839454,+ | ||
}} | }} |
Latest revision as of 13:17, 30 July 2015
Short description: | p@chr5:172839446..172839454, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:172839446..172839454, + |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.82e-21 | 1 |
seromucus secreting cell | 2.47e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.28e-17 | 5 |
pharyngeal pouch | 4.28e-17 | 5 |
thyroid diverticulum | 4.28e-17 | 5 |
pharyngeal pouch 2 | 4.28e-17 | 5 |
thyroid primordium | 4.28e-17 | 5 |
throat | 2.02e-11 | 2 |
open tracheal system trachea | 3.02e-11 | 2 |
entire pharyngeal arch endoderm | 2.72e-08 | 11 |
early pharyngeal endoderm | 2.72e-08 | 11 |
medulla oblongata | 7.26e-08 | 3 |
myelencephalon | 7.26e-08 | 3 |
future myelencephalon | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.82e-21 | 1 |
clear cell adenocarcinoma | 4.52e-11 | 2 |
adenocarcinoma | 9.68e-08 | 25 |