FFCP PHASE1:Hg19::chr1:25358993..25359005,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:25358993..25359005,+ | |||
|coexpression_cluster_id=C2439 | |||
|description=CAGE_peak_at_chr1:25358993..25359005,+ | |description=CAGE_peak_at_chr1:25358993..25359005,+ | ||
|id=chr1:25358993..25359005,+ | |id=chr1:25358993..25359005,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.75e-90!42;CL:0000860!2.65e-87!45;CL:0000738!1.00e-69!140;CL:0002087!1.08e-67!119;CL:0000766!1.38e-63!76;CL:0000557!4.93e-62!71;CL:0002031!1.78e-61!124;CL:0002194!3.32e-61!63;CL:0000576!3.32e-61!63;CL:0000040!3.32e-61!63;CL:0000559!3.32e-61!63;CL:0000839!8.26e-60!70;CL:0002009!5.24e-59!65;CL:0000037!3.31e-58!172;CL:0000566!3.31e-58!172;CL:0000988!3.48e-54!182;CL:0002032!1.10e-50!165;CL:0000837!1.10e-50!165;CL:0000763!1.51e-41!112;CL:0000049!1.51e-41!112;CL:0002393!4.18e-23!9;CL:0002397!4.18e-23!9;CL:0000134!4.93e-20!358;CL:0002320!2.36e-19!365;CL:0000219!5.88e-17!390;CL:0000034!8.28e-15!444;CL:0000048!4.29e-14!430;CL:0000723!1.10e-13!436;CL:0000767!1.59e-09!3;CL:0000623!1.93e-09!3;CL:0000825!1.93e-09!3;CL:0000842!3.89e-09!3;CL:0000838!4.82e-09!52;CL:0000542!8.35e-09!53;CL:0000051!8.35e-09!53;CL:0000875!4.02e-08!3;CL:0002396!4.02e-08!3;CL:0000624!3.14e-07!6;CL:0000224!6.16e-07!4 | |ontology_enrichment_celltype=CL:0002057!9.75e-90!42;CL:0000860!2.65e-87!45;CL:0000738!1.00e-69!140;CL:0002087!1.08e-67!119;CL:0000766!1.38e-63!76;CL:0000557!4.93e-62!71;CL:0002031!1.78e-61!124;CL:0002194!3.32e-61!63;CL:0000576!3.32e-61!63;CL:0000040!3.32e-61!63;CL:0000559!3.32e-61!63;CL:0000839!8.26e-60!70;CL:0002009!5.24e-59!65;CL:0000037!3.31e-58!172;CL:0000566!3.31e-58!172;CL:0000988!3.48e-54!182;CL:0002032!1.10e-50!165;CL:0000837!1.10e-50!165;CL:0000763!1.51e-41!112;CL:0000049!1.51e-41!112;CL:0002393!4.18e-23!9;CL:0002397!4.18e-23!9;CL:0000134!4.93e-20!358;CL:0002320!2.36e-19!365;CL:0000219!5.88e-17!390;CL:0000034!8.28e-15!444;CL:0000048!4.29e-14!430;CL:0000723!1.10e-13!436;CL:0000767!1.59e-09!3;CL:0000623!1.93e-09!3;CL:0000825!1.93e-09!3;CL:0000842!3.89e-09!3;CL:0000838!4.82e-09!52;CL:0000542!8.35e-09!53;CL:0000051!8.35e-09!53;CL:0000875!4.02e-08!3;CL:0002396!4.02e-08!3;CL:0000624!3.14e-07!6;CL:0000224!6.16e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.32e-66;33!CL:0002057;9.32e-66;33!CL:0000473;2.58e-48;39!CL:0000234;2.58e-48;39!CL:0000576;2.34e-39;48!CL:0000766;2.43e-21;69!CL:0000767;1.13e-18;3!CL:0000763;2.90e-13;100!CL:0002087;6.06e-13;104!CL:0002393;9.25e-10;6!CL:0002397;9.25e-10;6!CL:0000226;7.59e-09;3!CL:0000623;7.59e-09;3!CL:0000842;7.59e-09;3!CL:0000738;9.02e-08;136!CL:0000094;2.57e-07;8!CL:0002032;3.00e-07;1!CL:0000557;3.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.51e-73,42;CL:0002057,7.51e-73,42;CL:0000473,3.57e-63,48;CL:0000234,3.57e-63,48;CL:0000766,9.13e-52,72;CL:0002194,1.28e-49,59;CL:0000576,1.28e-49,59;CL:0000040,1.28e-49,59;CL:0000559,1.28e-49,59;CL:0002009,7.17e-48,61;CL:0000557,3.13e-47,67;CL:0000839,5.93e-44,66;CL:0000763,8.18e-36,108;CL:0000049,8.18e-36,108;CL:0000738,8.50e-35,136;CL:0002087,2.26e-33,115;CL:0000037,2.70e-29,168;CL:0000988,1.55e-27,177;CL:0002031,8.10e-27,120;CL:0002032,1.92e-26,161;CL:0000837,1.92e-26,161;CL:0000767,1.44e-18,3;CL:0000134,5.44e-11,354;CL:0002320,1.15e-10,361;CL:0000219,1.60e-09,386;CL:0000034,2.02e-09,441;CL:0000623,5.08e-09,3;CL:0000825,5.08e-09,3;CL:0000226,7.60e-09,3;CL:0000842,7.60e-09,3;CL:0000048,4.05e-08,427;CL:0000723,6.33e-08,433;CL:0000094,2.81e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-52;42!CL:0000049;8.20e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.27e-56!80;UBERON:0001474!6.99e-52!86;UBERON:0002390!5.73e-49!102;UBERON:0003061!5.73e-49!102;UBERON:0002193!1.50e-45!112;UBERON:0004765!1.78e-42!101;UBERON:0001434!1.78e-42!101;UBERON:0002405!1.31e-39!115;UBERON:0002204!3.79e-21!167;UBERON:0002384!2.00e-18!375;UBERON:0003081!9.59e-17!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.75e-41,76;UBERON:0001474,7.84e-38,82;UBERON:0002390,8.91e-37,98;UBERON:0003061,8.91e-37,98;UBERON:0004765,4.39e-34,90;UBERON:0002193,6.13e-33,108;UBERON:0002405,7.65e-33,93;UBERON:0001434,3.12e-30,100;UBERON:0002204,3.07e-16,167;UBERON:0003081,3.27e-15,203;UBERON:0002384,3.19e-10,371;UBERON:0000926,5.58e-08,315;UBERON:0004120,5.58e-08,315;UBERON:0006603,5.58e-08,315 | |||
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|short_description=p@chr1:25358993..25359005,+ | |short_description=p@chr1:25358993..25359005,+ | ||
}} | }} |
Latest revision as of 06:24, 28 July 2015
Short description: | p@chr1:25358993..25359005, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:25358993..25359005, + |
Coexpression cluster: | C2439_CD34_CD14_Basophils_Peripheral_Natural_CD19_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.75e-41 | 76 |
bone element | 7.84e-38 | 82 |
hematopoietic system | 8.91e-37 | 98 |
blood island | 8.91e-37 | 98 |
skeletal element | 4.39e-34 | 90 |
hemolymphoid system | 6.13e-33 | 108 |
immune system | 7.65e-33 | 93 |
skeletal system | 3.12e-30 | 100 |
musculoskeletal system | 3.07e-16 | 167 |
lateral plate mesoderm | 3.27e-15 | 203 |
connective tissue | 3.19e-10 | 371 |
mesoderm | 5.58e-08 | 315 |
mesoderm-derived structure | 5.58e-08 | 315 |
presumptive mesoderm | 5.58e-08 | 315 |