FFCP PHASE1:Hg19::chr12:7187749..7187783,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:7187749..7187783,-
|short_description=p@chr12:7187749..7187783,-
|description=CAGE_peak_at_chr12:7187749..7187783,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:7187749..7187783,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:7187749..7187783,- | |||
|id=chr12:7187749..7187783,- | |||
|ontology_enrichment_celltype=CL:0000055!6.83e-09!180;CL:0000057!8.07e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000214;6.55e-13;3!CL:0000182;1.56e-12;12!CL:0000153;1.56e-09;9!CL:0000447;1.56e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,5.81e-13,3;CL:0000182,1.23e-12,12;CL:0000153,1.33e-09,9;CL:0000447,1.33e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.13e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;2.62e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.08e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.89e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.79e-16;9!UBERON:0000042;3.79e-16;9!UBERON:0006915;6.55e-13;3!UBERON:0007616;6.55e-13;3!UBERON:0002217;6.55e-13;3!UBERON:0002018;6.55e-13;3!UBERON:0002107;5.89e-12;19!UBERON:0006925;5.89e-12;19!UBERON:0002134;2.62e-10;1!UBERON:0005208;2.62e-10;1!UBERON:0004145;2.62e-10;1!UBERON:0005946;2.62e-10;1!UBERON:0005965;2.62e-10;1!UBERON:0002078;2.62e-10;1!UBERON:0002423;4.74e-09;25!UBERON:0002365;1.64e-07;31!UBERON:0002330;1.64e-07;31!UBERON:0003688;6.88e-07;6!UBERON:0002358;6.88e-07;6!UBERON:0003684;6.88e-07;6!UBERON:0001178;6.88e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,5.81e-13,3;UBERON:0007616,5.81e-13,3;UBERON:0002217,5.81e-13,3;UBERON:0002018,5.81e-13,3;UBERON:0004457,3.59e-12,12;UBERON:0000042,3.59e-12,12;UBERON:0002107,5.07e-12,19;UBERON:0006925,5.07e-12,19;UBERON:0008836,5.07e-12,19;UBERON:0008835,2.31e-10,22;UBERON:0003894,2.31e-10,22;UBERON:0002134,2.74e-10,1;UBERON:0005208,2.74e-10,1;UBERON:0005946,2.74e-10,1;UBERON:0005965,2.74e-10,1;UBERON:0002078,2.74e-10,1;UBERON:0009854,6.63e-10,23;UBERON:0007499,4.24e-09,25;UBERON:0009497,4.24e-09,25;UBERON:0000015,4.24e-09,25;UBERON:0002423,4.24e-09,25;UBERON:0006235,4.24e-09,25;UBERON:0004161,4.24e-09,25;UBERON:0002417,9.27e-09,60;UBERON:0000916,9.27e-09,60;UBERON:0009856,9.63e-09,26;UBERON:0002365,2.65e-07,31;UBERON:0002330,2.65e-07,31;UBERON:0003688,7.30e-07,6;UBERON:0002358,7.30e-07,6;UBERON:0003684,7.30e-07,6;UBERON:0001178,7.30e-07,6 | |||
|phase1_expression=0.726713517082227,0.214100523890983,1.69145284915165,0,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0,1.80719576192283,0,0.869079113764942,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,2.0078563452417,0.354668382198357,0.560677600142307,0,0,0,0,0,0.756787138224657,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0,0,0.358779271377724,0.213557388818567,1.05965950579781,0,0.103052529238439,0.257640540045629,0.744467425326359,0.337552664482532,0,0.252433774244115,2.85354685791128,0.484938170456436,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0.4115740113314,0,13.9430538304014,1.96565443335525,12.9973779469909,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.577465791044295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.736148950314839,0,0,0.831883446123229,0.535286966391485,0.157702415033935,0.468565659970853,0.300946099727719,0,0,0,0,0.521301686808497,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,1.28139149255701,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0,0,0.918515585316854,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0,0,1.84820148105653,0.532306030317022,0,0,0,0,0,0.190630193923825,0,1.71175595213568,1.27281299170375,0,0.359744915166629,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0.9554993798559,0.141405431953713,0,0.551365343546124,0.66343897524122,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0,1.26664581178598,1.97576935775941,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.591095237907095,0,0,0.139423744278603,0.615602068030377,0.91153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.240476460754601,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0.837847203816763,0,1.43574604915363,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.394028536495991,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.511164065356265,0.226624183040251,1.31897010310274,0,0,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.489473409012935,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0,1.71488009437418,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,4.7775168788705,0.142953088353313,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.392616934229891,0.594092800654172,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0.357107877211315,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0.743990036333503,2.31087814315709,0.432626562123789,0,0,0,0,0,0,0,0.985123076837112,0,0,0,0,0,0,0,0,0.318235791390825,0,0,0,0.134704106029175,0.78894425931944,0,0,0.426909383510862,0,0,2.34640942403454,0.366724332548599,0,0,0,0 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|phase1_expression=0.726713517082227,0.214100523890983,1.69145284915165,0,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0,1.80719576192283,0,0.869079113764942,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,2.0078563452417,0.354668382198357,0.560677600142307,0,0,0,0,0,0.756787138224657,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0,0,0.358779271377724,0.213557388818567,1.05965950579781,0,0.103052529238439,0.257640540045629,0.744467425326359,0.337552664482532,0,0.252433774244115,2.85354685791128,0.484938170456436,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0.4115740113314,0,13.9430538304014,1.96565443335525,12.9973779469909,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.577465791044295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.736148950314839,0,0,0.831883446123229,0.535286966391485,0.157702415033935,0.468565659970853,0.300946099727719,0,0,0,0,0.521301686808497,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,1.28139149255701,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0,0,0.918515585316854,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0,0,0.0890320356467374,0,0,0,0,0,0,0,1.84820148105653,0.532306030317022,0,0,0,0,0,0.190630193923825,0,1.71175595213568,1.27281299170375,0,0.359744915166629,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0.9554993798559,0.141405431953713,0,0.551365343546124,0.66343897524122,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0,1.26664581178598,1.97576935775941,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.591095237907095,0,0,0.139423744278603,0.615602068030377,0.91153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.240476460754601,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0.837847203816763,0,1.43574604915363,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.394028536495991,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.511164065356265,0.226624183040251,1.31897010310274,0,0,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.489473409012935,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0,1.71488009437418,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,4.7775168788705,0.142953088353313,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.392616934229891,0.594092800654172,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0.357107877211315,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0.743990036333503,2.31087814315709,0.432626562123789,0,0,0,0,0,0,0,0.985123076837112,0,0,0,0,0,0,0,0,0.318235791390825,0,0,0,0.134704106029175,0.78894425931944,0,0,0.426909383510862,0,0,2.34640942403454,0.366724332548599,0,0,0,0 | ||
|short_description=p@chr12:7187749..7187783,- | |||
}} | }} |
Latest revision as of 12:12, 24 July 2015
Short description: | p@chr12:7187749..7187783, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7187749..7187783, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 5.81e-13 | 3 |
hepatocyte | 1.23e-12 | 12 |
GAG secreting cell | 1.33e-09 | 9 |
carbohydrate secreting cell | 1.33e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 5.81e-13 | 3 |
layer of synovial tissue | 5.81e-13 | 3 |
synovial joint | 5.81e-13 | 3 |
synovial membrane of synovial joint | 5.81e-13 | 3 |
cavity lining | 3.59e-12 | 12 |
serous membrane | 3.59e-12 | 12 |
liver | 5.07e-12 | 19 |
digestive gland | 5.07e-12 | 19 |
liver bud | 5.07e-12 | 19 |
hepatic diverticulum | 2.31e-10 | 22 |
liver primordium | 2.31e-10 | 22 |
tricuspid valve | 2.74e-10 | 1 |
right atrium valve | 2.74e-10 | 1 |
outflow tract of atrium | 2.74e-10 | 1 |
outflow part of right atrium | 2.74e-10 | 1 |
right cardiac atrium | 2.74e-10 | 1 |
digestive tract diverticulum | 6.63e-10 | 23 |
epithelial sac | 4.24e-09 | 25 |
epithelium of foregut-midgut junction | 4.24e-09 | 25 |
anatomical boundary | 4.24e-09 | 25 |
hepatobiliary system | 4.24e-09 | 25 |
foregut-midgut junction | 4.24e-09 | 25 |
septum transversum | 4.24e-09 | 25 |
abdominal segment of trunk | 9.27e-09 | 60 |
abdomen | 9.27e-09 | 60 |
sac | 9.63e-09 | 26 |
exocrine gland | 2.65e-07 | 31 |
exocrine system | 2.65e-07 | 31 |
omentum | 7.30e-07 | 6 |
peritoneum | 7.30e-07 | 6 |
abdominal cavity | 7.30e-07 | 6 |
visceral peritoneum | 7.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.08e-10 | 1 |