FFCP PHASE1:Hg19::chr1:239882791..239882794,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1131 | |EntrezGene=1131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1952 | |HGNC=1952 | ||
|TSSclassifier=strong | |||
|UniProt=B1AN12 | |UniProt=B1AN12 | ||
|association_with_transcript=-48bp_to_ENST00000448020_5end | |association_with_transcript=-48bp_to_ENST00000448020_5end | ||
|cluster_id=chr1:239882791..239882794,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_25_at_CHRM3_5end | |description=CAGE_peak_25_at_CHRM3_5end | ||
|id=chr1:239882791..239882794,+ | |id=chr1:239882791..239882794,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!4.20e-29!1;UBERON:0001961!4.20e-29!1;UBERON:0001744!4.20e-29!1;UBERON:0001735!4.20e-29!1;UBERON:0001255!2.37e-15!2;UBERON:0001556!2.37e-15!2;UBERON:0000162!4.56e-09!14;UBERON:0001353!4.56e-09!14;UBERON:0000163!4.56e-09!14;UBERON:0006866!4.56e-09!14;UBERON:0000164!4.56e-09!14;UBERON:0000931!4.56e-09!14;UBERON:0004122!1.59e-08!15;UBERON:0000161!6.01e-08!35;UBERON:0000966!4.79e-07!5;UBERON:0005388!4.79e-07!5;UBERON:0001802!4.79e-07!5;UBERON:0001046!6.38e-07!19 | |ontology_enrichment_uberon=UBERON:0002372!4.20e-29!1;UBERON:0001961!4.20e-29!1;UBERON:0001744!4.20e-29!1;UBERON:0001735!4.20e-29!1;UBERON:0001255!2.37e-15!2;UBERON:0001556!2.37e-15!2;UBERON:0000162!4.56e-09!14;UBERON:0001353!4.56e-09!14;UBERON:0000163!4.56e-09!14;UBERON:0006866!4.56e-09!14;UBERON:0000164!4.56e-09!14;UBERON:0000931!4.56e-09!14;UBERON:0004122!1.59e-08!15;UBERON:0000161!6.01e-08!35;UBERON:0000966!4.79e-07!5;UBERON:0005388!4.79e-07!5;UBERON:0001802!4.79e-07!5;UBERON:0001046!6.38e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0001871;1.91e-15;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0001871,1.91e-15,6;UBERON:0003056,1.20e-07,61 | |||
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|short_description=p25@CHRM3 | |short_description=p25@CHRM3 | ||
}} | }} |
Latest revision as of 16:28, 16 September 2015
Short description: | p25@CHRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_CHRM3_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -48bp_to_ENST00000448020_5end |
EntrezGene: | CHRM3 |
HGNC: | 1952 |
UniProt: | B1AN12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
temporal lobe | 1.91e-15 | 6 |
pre-chordal neural plate | 1.20e-07 | 61 |