FFCP PHASE1:Hg19::chr5:149782838..149782866,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=972 | |EntrezGene=972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1697 | |HGNC=1697 | ||
|TSSclassifier=strong | |||
|UniProt=O78208 | |UniProt=O78208 | ||
|association_with_transcript=8bp_to_M28590_5end | |association_with_transcript=8bp_to_M28590_5end | ||
|cluster_id=chr5:149782838..149782866,- | |||
|coexpression_cluster_id=C187 | |||
|description=CAGE_peak_5_at_CD74_5end | |description=CAGE_peak_5_at_CD74_5end | ||
|id=chr5:149782838..149782866,- | |id=chr5:149782838..149782866,- | ||
|ontology_enrichment_celltype=CL:0000738!2.51e-53!140;CL:0002087!2.20e-47!119;CL:0002031!5.82e-43!124;CL:0000037!1.02e-38!172;CL:0000566!1.02e-38!172;CL:0002009!9.22e-38!65;CL:0002032!2.65e-37!165;CL:0000837!2.65e-37!165;CL:0000988!4.38e-36!182;CL:0000766!5.61e-36!76;CL:0002194!1.09e-35!63;CL:0000576!1.09e-35!63;CL:0000040!1.09e-35!63;CL:0000559!1.09e-35!63;CL:0000557!1.10e-33!71;CL:0002057!1.29e-32!42;CL:0000839!6.04e-31!70;CL:0000860!2.85e-29!45;CL:0000763!4.72e-25!112;CL:0000049!4.72e-25!112;CL:0000945!7.12e-12!24;CL:0000826!7.12e-12!24;CL:0000542!5.05e-11!53;CL:0000051!5.05e-11!53;CL:0000990!7.47e-11!8;CL:0000838!9.44e-11!52;CL:0000451!4.58e-10!10;CL:0000236!5.96e-08!14;CL:0000840!1.15e-07!5;CL:0001029!1.15e-07!5;CL:0002393!4.34e-07!9;CL:0002397!4.34e-07!9;CL:0000453!6.47e-07!5 | |ontology_enrichment_celltype=CL:0000738!2.51e-53!140;CL:0002087!2.20e-47!119;CL:0002031!5.82e-43!124;CL:0000037!1.02e-38!172;CL:0000566!1.02e-38!172;CL:0002009!9.22e-38!65;CL:0002032!2.65e-37!165;CL:0000837!2.65e-37!165;CL:0000988!4.38e-36!182;CL:0000766!5.61e-36!76;CL:0002194!1.09e-35!63;CL:0000576!1.09e-35!63;CL:0000040!1.09e-35!63;CL:0000559!1.09e-35!63;CL:0000557!1.10e-33!71;CL:0002057!1.29e-32!42;CL:0000839!6.04e-31!70;CL:0000860!2.85e-29!45;CL:0000763!4.72e-25!112;CL:0000049!4.72e-25!112;CL:0000945!7.12e-12!24;CL:0000826!7.12e-12!24;CL:0000542!5.05e-11!53;CL:0000051!5.05e-11!53;CL:0000990!7.47e-11!8;CL:0000838!9.44e-11!52;CL:0000451!4.58e-10!10;CL:0000236!5.96e-08!14;CL:0000840!1.15e-07!5;CL:0001029!1.15e-07!5;CL:0002393!4.34e-07!9;CL:0002397!4.34e-07!9;CL:0000453!6.47e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-47;33!CL:0002057;1.83e-47;33!CL:0000473;2.66e-47;39!CL:0000234;2.66e-47;39!CL:0000576;6.38e-36;48!CL:0000766;9.90e-24;69!CL:0000990;1.25e-19;8!CL:0000451;8.48e-19;10!CL:0000738;8.17e-15;136!CL:0002087;9.64e-15;104!CL:0000840;1.90e-13;5!CL:0000235;1.35e-12;6!CL:0000453;5.78e-12;5!CL:0000763;1.79e-11;100!CL:0000988;8.72e-10;177!CL:0000945;2.04e-08;24!CL:0000236;3.82e-08;13!CL:0002393;1.79e-07;6!CL:0002397;1.79e-07;6!CL:0000219;3.97e-07;193!CL:0002619;7.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.28e-73,61;CL:0002194,1.67e-69,59;CL:0000576,1.67e-69,59;CL:0000040,1.67e-69,59;CL:0000559,1.67e-69,59;CL:0000557,1.10e-65,67;CL:0000473,8.52e-64,48;CL:0000234,8.52e-64,48;CL:0000738,1.72e-62,136;CL:0000839,1.33e-60,66;CL:0000766,1.48e-59,72;CL:0002087,3.54e-58,115;CL:0002031,1.27e-53,120;CL:0000860,9.11e-53,42;CL:0002057,9.11e-53,42;CL:0000037,1.10e-46,168;CL:0000763,1.38e-44,108;CL:0000049,1.38e-44,108;CL:0002032,2.30e-43,161;CL:0000837,2.30e-43,161;CL:0000988,2.85e-43,177;CL:0000990,1.41e-19,8;CL:0000451,1.27e-18,10;CL:0000840,2.09e-13,5;CL:0001029,2.09e-13,5;CL:0000134,1.76e-12,354;CL:0000235,2.08e-12,6;CL:0000453,5.91e-12,5;CL:0002320,7.08e-12,361;CL:0000219,9.01e-10,386;CL:0000945,1.87e-08,24;CL:0000826,1.87e-08,24;CL:0000236,1.89e-07,14;CL:0000048,2.84e-07,427;CL:0000723,6.16e-07,433;CL:0000034,6.51e-07,441;CL:0002619,6.87e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.23e-38;42!CL:0000049;2.54e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.20e-36!115;UBERON:0002390!4.27e-36!102;UBERON:0003061!4.27e-36!102;UBERON:0002193!9.29e-33!112;UBERON:0002371!2.47e-27!80;UBERON:0001474!6.92e-24!86;UBERON:0002405!4.46e-23!115;UBERON:0004765!5.99e-18!101;UBERON:0001434!5.99e-18!101;UBERON:0001049!6.79e-11!57;UBERON:0005068!6.79e-11!57;UBERON:0006241!6.79e-11!57;UBERON:0007135!6.79e-11!57;UBERON:0003081!1.28e-09!216;UBERON:0002616!7.02e-08!59;UBERON:0002780!1.77e-07!41;UBERON:0001890!1.77e-07!41;UBERON:0006240!1.77e-07!41;UBERON:0003080!3.93e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.09e-56,76;UBERON:0002390,2.00e-53,98;UBERON:0003061,2.00e-53,98;UBERON:0001474,6.76e-51,82;UBERON:0002405,4.05e-49,93;UBERON:0002193,5.76e-49,108;UBERON:0004765,5.10e-45,90;UBERON:0001434,5.37e-39,100;UBERON:0003081,5.13e-22,203;UBERON:0002204,2.57e-18,167;UBERON:0002384,1.29e-11,371;UBERON:0000926,3.80e-11,315;UBERON:0004120,3.80e-11,315;UBERON:0006603,3.80e-11,315;UBERON:0007023,5.82e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940364164434263,0.286235987131057,0.136874425072884,0,1.22261449196722,0.903106483949403,1.41679406364623,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0.309868802321207,0.142169232487422,0,0.553995408531877,2.60707781711184,1.51907609501096,2.91090116511902,3.2389366601898,3.60605794687861,3.05336301437086,3.02300754951048,3.63876091781724,2.78914844286822,2.87817521615278,4.33588919253145,5.17846306179871,4.86705342405291,2.12834006899727,2.06847408441971,0,0,3.9530891303947,4.91231070104122,2.47195832889593,3.36692281607993,2.88836124368484,2.55734850319616,1.64925650093358,6.58230070151385,5.96714650745772,3.77272010217159,5.10646702222026,6.22822248995575,3.76872997885115,4.69334626578181,3.69221035998698,4.23779651843358,1.84138817993782,2.21523671208619,1.05627643155971,2.12604299965044,1.25795187305026,1.90958672949042,1.05123824989054,2.08943262706204,0.570025487482497,0.39783335439818,0.730656615058536,0,0.546138611262131,1.77901850772711,2.13365111283254,1.20118796110804,1.72425731986345,2.64417949113945,0.954053754535364,1.1384259382189,5.87237189370939,4.20500550937752,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0.557052284425868,0.883817722424512,0,0.270803863765016,0.640456598628376,0.650296737799391,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0.68725489096526,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,1.20964045934839,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,6.81549526674835,8.00996791576629,22.7358112487259,2.14641561874808,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,4.18568910348575,1.17002132569619,3.41851673264075,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,13.378615870531,8.53837055434615,4.21667878966063,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.256686072559497,0.254094624222463,0,0,0,0,0.749007023947182,8.97484377612075,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.5885704098234,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,1.01489521846434,0,0.569647187174163,0.952927101831156,0.411362273086194,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,4.1234052182667,0,0,0,0,2.98244294329889,0.984685914873589,0,0.329607748453519,0,1.39473591775749,1.93398740871803,0,0,1.35393286007176,0,0,0,0,0.690503839458535,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.221158519862449,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0,0,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0.123563938946503,0.626531697032732,0.943615861729479,0,0.468528891450678,0.729819156862664,0,0,2.36750641709634,0,0,2.46427660551103,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0.189932387867636,0,0,1.70762395791482,0.39961921916426,0,0,0,0.288109595976299,0,0,0,0,0,0,0,1.50595916781192,0,0,0,0.837847203816763,0.458320848023367,0,0.399358000997982,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0.164831716762333,0.0674035438541849,0,0.508039992394707,0,0.681017030557878,0,0,0,9.44890344516302,15.476039091159,0.121499113316049,0,1.26089131678717,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.517131825446202,0.52893040697076,0,0,2.99004755189545,0.471612915298998,7.45630299624952,3.47316215268366,0,1.94868157409433,0,0,0,0.306345576763462,0,0,0,0.488105059607853,0.625954653532499,1.72022758707021,1.66393577305278,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,33.7108334292142,17.8038886019907,13.0852315404675,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.478901577171454,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0.733714394086716,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0,1.64477330057155,1.98484471355718,0,0,0,0.336283722218824,0,0.455324382702595,0.266107110487916,0.345701962667338,0.171488009437418,0.0679697329768317,0.197318320688547,0,0,0.470958557103084,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,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| ||
|short_description=p5@CD74 | |short_description=p5@CD74 | ||
}} | }} |
Latest revision as of 04:31, 16 September 2015
Short description: | p5@CD74 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD74_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 8bp_to_M28590_5end |
EntrezGene: | CD74 |
HGNC: | 1697 |
UniProt: | O78208 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.09e-56 | 76 |
hematopoietic system | 2.00e-53 | 98 |
blood island | 2.00e-53 | 98 |
bone element | 6.76e-51 | 82 |
immune system | 4.05e-49 | 93 |
hemolymphoid system | 5.76e-49 | 108 |
skeletal element | 5.10e-45 | 90 |
skeletal system | 5.37e-39 | 100 |
lateral plate mesoderm | 5.13e-22 | 203 |
musculoskeletal system | 2.57e-18 | 167 |
connective tissue | 1.29e-11 | 371 |
mesoderm | 3.80e-11 | 315 |
mesoderm-derived structure | 3.80e-11 | 315 |
presumptive mesoderm | 3.80e-11 | 315 |
adult organism | 5.82e-07 | 114 |