FFCP PHASE1:Hg19::chr5:149669586..149669603,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=815 | |EntrezGene=815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1460 | |HGNC=1460 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFJ0 | |UniProt=D6RFJ0 | ||
|association_with_transcript=23bp_to_ENST00000510347_5end | |association_with_transcript=23bp_to_ENST00000510347_5end | ||
|cluster_id=chr5:149669586..149669603,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_CAMK2A_5end | |description=CAGE_peak_6_at_CAMK2A_5end | ||
|id=chr5:149669586..149669603,- | |id=chr5:149669586..149669603,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.75e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!2.47e-79!22;UBERON:0001893!2.06e-76!34;UBERON:0001869!4.41e-74!32;UBERON:0002791!1.79e-71!33;UBERON:0000956!9.75e-70!25;UBERON:0000203!9.75e-70!25;UBERON:0002020!3.25e-69!34;UBERON:0003528!3.25e-69!34;UBERON:0001950!5.16e-69!20;UBERON:0002780!7.03e-69!41;UBERON:0001890!7.03e-69!41;UBERON:0006240!7.03e-69!41;UBERON:0003080!3.63e-67!42;UBERON:0001049!2.30e-62!57;UBERON:0005068!2.30e-62!57;UBERON:0006241!2.30e-62!57;UBERON:0007135!2.30e-62!57;UBERON:0001017!1.63e-60!82;UBERON:0002616!4.12e-60!59;UBERON:0000955!1.20e-58!69;UBERON:0006238!1.20e-58!69;UBERON:0005743!1.66e-57!86;UBERON:0000073!1.22e-51!94;UBERON:0001016!1.22e-51!94;UBERON:0003075!1.14e-46!86;UBERON:0007284!1.14e-46!86;UBERON:0007023!1.09e-45!115;UBERON:0003056!4.14e-45!61;UBERON:0002346!2.25e-44!90;UBERON:0000153!3.97e-34!129;UBERON:0007811!3.97e-34!129;UBERON:0000033!1.87e-33!123;UBERON:0000349!3.49e-28!5;UBERON:0004121!1.36e-26!169;UBERON:0001871!6.75e-26!7;UBERON:0000924!7.43e-26!173;UBERON:0006601!7.43e-26!173;UBERON:0000200!6.47e-25!6;UBERON:0001872!1.44e-19!5;UBERON:0002021!1.74e-19!5;UBERON:0002771!1.87e-18!3;UBERON:0000025!8.24e-15!194;UBERON:0001954!2.42e-12!2;UBERON:0003022!2.42e-12!2;UBERON:0002421!2.42e-12!2;UBERON:0002600!2.42e-12!2;UBERON:0001876!2.88e-12!2;UBERON:0002360!3.23e-12!2;UBERON:0000094!3.23e-12!2;UBERON:0007645!3.23e-12!2;UBERON:0004111!6.84e-11!241;UBERON:0000064!3.17e-10!219;UBERON:0002420!3.44e-10!9;UBERON:0007245!3.44e-10!9;UBERON:0010009!3.44e-10!9;UBERON:0010011!3.44e-10!9;UBERON:0000454!3.44e-10!9;UBERON:0000477!2.88e-09!286;UBERON:0000483!4.75e-09!309;UBERON:0000119!6.58e-09!312;UBERON:0000475!2.17e-08!365;UBERON:0000988!3.44e-08!3;UBERON:0002581!1.46e-07!1;UBERON:0002902!1.55e-07!1;UBERON:0009899!1.55e-07!1;UBERON:0002022!2.10e-07!1;UBERON:0007190!2.23e-07!1;UBERON:0001882!4.57e-07!1;UBERON:0005403!4.57e-07!1;UBERON:0003112!5.14e-07!1;UBERON:0000032!5.14e-07!1;UBERON:0005253!5.14e-07!1;UBERON:0003128!5.14e-07!1;UBERON:0002241!5.14e-07!1;UBERON:0001703!5.14e-07!1;UBERON:0004761!5.14e-07!1;UBERON:0009617!5.14e-07!1;UBERON:0002336!6.88e-07!1;UBERON:0001018!6.88e-07!1;UBERON:0002473!6.88e-07!1;UBERON:0005340!6.88e-07!1;UBERON:0002316!6.88e-07!1;UBERON:0003544!6.88e-07!1;UBERON:0001020!6.88e-07!1;UBERON:0005970!6.88e-07!1;UBERON:0002437!6.88e-07!1;UBERON:0001874!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.10e-86;22!UBERON:0001950;5.09e-83;20!UBERON:0000956;1.99e-76;25!UBERON:0000203;1.99e-76;25!UBERON:0001869;5.00e-67;32!UBERON:0001893;2.89e-65;34!UBERON:0002791;3.55e-58;32!UBERON:0003528;6.90e-55;34!UBERON:0002020;6.90e-55;34!UBERON:0002780;2.30e-39;41!UBERON:0001890;2.30e-39;41!UBERON:0000200;3.59e-38;6!UBERON:0001872;9.90e-30;5!UBERON:0002021;9.90e-30;5!UBERON:0000073;3.40e-23;53!UBERON:0002616;3.40e-23;53!UBERON:0001017;1.24e-21;75!UBERON:0000955;1.03e-19;68!UBERON:0002771;3.43e-19;2!UBERON:0001016;6.50e-14;83!UBERON:0001870;4.56e-13;3!UBERON:0001871;1.94e-12;6!UBERON:0002581;7.06e-11;1!UBERON:0002902;7.06e-11;1!UBERON:0009899;7.06e-11;1!UBERON:0002022;1.13e-10;1!UBERON:0007190;1.13e-10;1!UBERON:0001882;3.78e-10;1!UBERON:0003112;3.78e-10;1!UBERON:0011158;3.78e-10;1!UBERON:0003128;3.78e-10;1!UBERON:0005403;3.78e-10;1!UBERON:0001703;3.78e-10;1!UBERON:0002241;3.78e-10;1!UBERON:0007023;1.64e-09;114!UBERON:0011216;1.04e-08;132!UBERON:0000349;5.61e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.97e-87,22;UBERON:0001950,4.24e-83,20;UBERON:0001869,5.18e-77,32;UBERON:0000956,1.66e-76,25;UBERON:0000203,1.66e-76,25;UBERON:0001893,1.80e-72,34;UBERON:0002791,5.17e-68,32;UBERON:0003528,5.44e-64,34;UBERON:0002020,5.44e-64,34;UBERON:0002780,5.62e-60,41;UBERON:0001890,5.62e-60,41;UBERON:0003080,5.62e-60,41;UBERON:0006240,5.62e-60,41;UBERON:0000073,4.40e-46,53;UBERON:0002616,4.40e-46,53;UBERON:0001017,3.08e-45,81;UBERON:0000955,4.59e-44,68;UBERON:0006238,4.59e-44,68;UBERON:0001049,1.60e-43,56;UBERON:0005068,1.60e-43,56;UBERON:0006241,1.60e-43,56;UBERON:0007135,1.60e-43,56;UBERON:0001016,1.56e-40,89;UBERON:0003056,8.38e-40,61;UBERON:0000200,3.73e-38,6;UBERON:0001872,8.55e-30,5;UBERON:0002021,1.15e-29,5;UBERON:0003075,4.58e-29,82;UBERON:0007284,4.58e-29,82;UBERON:0007023,6.16e-29,114;UBERON:0002346,1.32e-27,86;UBERON:0010371,2.07e-22,104;UBERON:0004121,4.96e-20,171;UBERON:0000924,4.96e-20,171;UBERON:0006601,4.96e-20,171;UBERON:0010314,2.35e-19,132;UBERON:0002771,2.86e-19,2;UBERON:0011216,2.64e-16,223;UBERON:0001870,4.03e-13,3;UBERON:0001871,1.83e-12,6;UBERON:0000025,6.44e-11,192;UBERON:0002581,6.73e-11,1;UBERON:0002902,7.40e-11,1;UBERON:0009899,7.40e-11,1;UBERON:0002022,1.19e-10,1;UBERON:0007190,1.30e-10,1;UBERON:0001882,3.96e-10,1;UBERON:0005403,3.96e-10,1;UBERON:0003112,4.75e-10,1;UBERON:0011158,4.75e-10,1;UBERON:0003128,4.75e-10,1;UBERON:0001703,4.75e-10,1;UBERON:0002241,4.75e-10,1;UBERON:0004761,4.75e-10,1;UBERON:0009617,4.75e-10,1;UBERON:0004111,3.61e-08,240;UBERON:0000349,5.61e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,1.94813006139888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91229661397042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,0.272406812223151,0,0,0,0,0,3.88797162611358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51497180137264,2.253436752717,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47727217721857,2.8339315265117,2.07524016774297,3.89721092057435,0,5.04847942988791,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24180406168294,3.90539049306924,2.27355476151302,2.66346402814409,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,5.45914020571647,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35145537221854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,1.94813006139888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91229661397042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,0.272406812223151,0,0,0,0,0,3.88797162611358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51497180137264,2.253436752717,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47727217721857,2.8339315265117,2.07524016774297,3.89721092057435,0,5.04847942988791,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24180406168294,3.90539049306924,2.27355476151302,2.66346402814409,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,5.45914020571647,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35145537221854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@CAMK2A | |short_description=p6@CAMK2A | ||
}} | }} |
Latest revision as of 03:52, 16 September 2015
Short description: | p6@CAMK2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CAMK2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 23bp_to_ENST00000510347_5end |
EntrezGene: | CAMK2A |
HGNC: | 1460 |
UniProt: | D6RFJ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data