FFCP PHASE1:Hg19::chr1:235813246..235813266,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2786 | |EntrezGene=2786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4407 | |HGNC=4407 | ||
|TSSclassifier=strong | |||
|UniProt=P50150,B1APZ0 | |UniProt=P50150,B1APZ0 | ||
|association_with_transcript=26bp_to_ENST00000391854,NM_001098722,uc001hxe.3_5end | |association_with_transcript=26bp_to_ENST00000391854,NM_001098722,uc001hxe.3_5end | ||
|cluster_id=chr1:235813246..235813266,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_7_at_GNG4_5end | |description=CAGE_peak_7_at_GNG4_5end | ||
|id=chr1:235813246..235813266,- | |id=chr1:235813246..235813266,- | ||
|ontology_enrichment_celltype=CL:0000047!1.98e-12!8;CL:0000540!8.08e-10!6;CL:0000031!8.08e-10!6;CL:0000404!8.08e-10!6;CL:0002319!3.08e-09!25 | |ontology_enrichment_celltype=CL:0000047!1.98e-12!8;CL:0000540!8.08e-10!6;CL:0000031!8.08e-10!6;CL:0000404!8.08e-10!6;CL:0002319!3.08e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0000333;4.72e-13;5!CL:0000540;4.16e-11;6!CL:0000404;4.16e-11;6!CL:0002319;1.27e-08;25!CL:0000167;6.62e-08;1!CL:0000164;6.62e-08;1!CL:0000502;6.62e-08;1!CL:0000172;6.62e-08;1!CL:0000173;6.62e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.28e-14,8;CL:0000540,4.46e-11,6;CL:0000031,4.46e-11,6;CL:0000404,4.46e-11,6;CL:0002319,1.42e-08,25;CL:0000167,9.94e-08,1;CL:0000164,9.94e-08,1;CL:0000502,9.94e-08,1;CL:0000172,9.94e-08,1;CL:0000173,9.94e-08,1;CL:0002351,9.94e-08,1;CL:0000133,1.14e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;4.16e-11;6!CL:0002351;6.62e-08;1 | |||
|ontology_enrichment_disease=DOID:3095!1.74e-10!22;DOID:2994!1.74e-10!22;DOID:171!1.32e-09!10;DOID:0050687!1.31e-07!143 | |ontology_enrichment_disease=DOID:3095!1.74e-10!22;DOID:2994!1.74e-10!22;DOID:171!1.32e-09!10;DOID:0050687!1.31e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:169;1.94e-18;6!DOID:171;8.51e-17;10!DOID:3095;1.58e-10;22!DOID:2994;1.58e-10;22!DOID:4430;6.62e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.78e-18,6;DOID:171,9.44e-17,10;DOID:3095,1.91e-10,22;DOID:2994,1.91e-10,22;DOID:4430,9.94e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.66e-35!82;UBERON:0000073!1.48e-34!94;UBERON:0001016!1.48e-34!94;UBERON:0005743!3.06e-34!86;UBERON:0001049!1.15e-25!57;UBERON:0005068!1.15e-25!57;UBERON:0006241!1.15e-25!57;UBERON:0007135!1.15e-25!57;UBERON:0000955!5.64e-23!69;UBERON:0006238!5.64e-23!69;UBERON:0002616!4.52e-21!59;UBERON:0002346!1.23e-20!90;UBERON:0002780!5.27e-20!41;UBERON:0001890!5.27e-20!41;UBERON:0006240!5.27e-20!41;UBERON:0002020!1.02e-19!34;UBERON:0003528!1.02e-19!34;UBERON:0001893!1.09e-19!34;UBERON:0001869!1.98e-19!32;UBERON:0003080!2.47e-19!42;UBERON:0002791!8.70e-19!33;UBERON:0000924!2.98e-18!173;UBERON:0006601!2.98e-18!173;UBERON:0003075!2.30e-17!86;UBERON:0007284!2.30e-17!86;UBERON:0004121!1.06e-15!169;UBERON:0000956!1.57e-15!25;UBERON:0000203!1.57e-15!25;UBERON:0001950!9.33e-15!20;UBERON:0002619!1.05e-14!22;UBERON:0003056!6.27e-13!61;UBERON:0000153!1.97e-12!129;UBERON:0007811!1.97e-12!129;UBERON:0000033!6.66e-12!123;UBERON:0007023!8.24e-12!115;UBERON:0000922!9.92e-08!612;UBERON:0003076!1.64e-07!15;UBERON:0003057!1.64e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.72e-13;5!UBERON:0002410;4.72e-13;5!UBERON:0002022;6.62e-08;1!UBERON:0000010;1.86e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.42e-13,5;UBERON:0002410,3.42e-13,5;UBERON:0001016,9.15e-12,89;UBERON:0002022,4.71e-08,1;UBERON:0001017,6.70e-08,81;UBERON:0000010,1.56e-07,8;UBERON:0004121,9.08e-07,171;UBERON:0000924,9.08e-07,171;UBERON:0006601,9.08e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,3.90419561572865,6.18631050222156,2.17771144934653,5.10351001322531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,1.25966373927138,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0.689486746482929,0,0.520874984799877,0,0.964771509003264,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0,1.85345908419754,0.417687798021821,0.337005664903385,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0.126373159256976,0.751617097072463,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.379864775735272,0,0,0,0.39961921916426,0,0.114536596165916,1.20116498503375,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.659326867049332,1.48287796479207,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0.415440338029185,0,0,1.57948847310864,0,0.0788057072991982,0.157363764404994,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0.468334905806882,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,1.66262682694747,14.6641743499487,0,5.78811082417674,1.18812770967818,0.212574920101683,0.247871528518004,0,0,0,0,0.352675943690684,0,0.642292250964595,0,0.319267718114302,0.41023272848151,3.27693205088234,0.414943514785307,0.161475645631851,0,0,0.11796972334774,0,0.346576998451015,0,0,0.198916222116275,1.27857558193737,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,1.64092442705466,0,0,0.527613733078862,0,0,0,0.606965604236632,0,0,0,0,0.203909198930495,0.197318320688547,0.118193840883968,0,0.078493092850514,0.471346769748006,0,0,0,0,0.0714765441766563,1.42212250559454,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,2.57333409808316,5.57062170451831,0.118920090777569,0.33883824611688,0.219881033490858,1.50962843566674,0,0.218559560503957,1.41095188908457,0,1.17838273550813,0.588925401344836,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.475940431336403,0.872701380680755,0,0,0,0,0.126166424835079,0.109265571963696,0,0.61193297845189,1.06886962106224,0.18378979906969,0,0,0,0.829169439458779,0,0,0,1.16260037704811,0.682821857254437,0,0,0,0,0,0.0673520530145875,0,0,0.325613074443898,0,0,3.32353247794371,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,3.90419561572865,6.18631050222156,2.17771144934653,5.10351001322531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,1.25966373927138,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0.689486746482929,0,0.520874984799877,0,0.964771509003264,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0,1.85345908419754,0.417687798021821,0.337005664903385,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0.126373159256976,0.751617097072463,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.379864775735272,0,0,0,0.39961921916426,0,0.114536596165916,1.20116498503375,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.659326867049332,1.48287796479207,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0.415440338029185,0,0,1.57948847310864,0,0.0788057072991982,0.157363764404994,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0.468334905806882,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,1.66262682694747,14.6641743499487,0,5.78811082417674,1.18812770967818,0.212574920101683,0.247871528518004,0,0,0,0,0.352675943690684,0,0.642292250964595,0,0.319267718114302,0.41023272848151,3.27693205088234,0.414943514785307,0.161475645631851,0,0,0.11796972334774,0,0.346576998451015,0,0,0.198916222116275,1.27857558193737,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,1.64092442705466,0,0,0.527613733078862,0,0,0,0.606965604236632,0,0,0,0,0.203909198930495,0.197318320688547,0.118193840883968,0,0.078493092850514,0.471346769748006,0,0,0,0,0.0714765441766563,1.42212250559454,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,2.57333409808316,5.57062170451831,0.118920090777569,0.33883824611688,0.219881033490858,1.50962843566674,0,0.218559560503957,1.41095188908457,0,1.17838273550813,0.588925401344836,0,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.475940431336403,0.872701380680755,0,0,0,0,0.126166424835079,0.109265571963696,0,0.61193297845189,1.06886962106224,0.18378979906969,0,0,0,0.829169439458779,0,0,0,1.16260037704811,0.682821857254437,0,0,0,0,0,0.0673520530145875,0,0,0.325613074443898,0,0,3.32353247794371,0,0,0,0,0,0 | ||
|short_description=p7@GNG4 | |short_description=p7@GNG4 | ||
}} | }} |
Latest revision as of 12:47, 16 September 2015
Short description: | p7@GNG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GNG4_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 26bp_to_ENST00000391854, NM_001098722, uc001hxe.3_5end |
EntrezGene: | GNG4 |
HGNC: | 4407 |
UniProt: | P50150B1APZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.28e-14 | 8 |
neuron | 4.46e-11 | 6 |
neuroblast | 4.46e-11 | 6 |
electrically signaling cell | 4.46e-11 | 6 |
neural cell | 1.42e-08 | 25 |
peptide hormone secreting cell | 9.94e-08 | 1 |
enteroendocrine cell | 9.94e-08 | 1 |
type D enteroendocrine cell | 9.94e-08 | 1 |
somatostatin secreting cell | 9.94e-08 | 1 |
pancreatic D cell | 9.94e-08 | 1 |
progenitor cell of endocrine pancreas | 9.94e-08 | 1 |
neurectodermal cell | 1.14e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.42e-13 | 5 |
autonomic nervous system | 3.42e-13 | 5 |
nervous system | 9.15e-12 | 89 |
insula | 4.71e-08 | 1 |
central nervous system | 6.70e-08 | 81 |
peripheral nervous system | 1.56e-07 | 8 |
ectoderm-derived structure | 9.08e-07 | 171 |
ectoderm | 9.08e-07 | 171 |
presumptive ectoderm | 9.08e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.78e-18 | 6 |
neuroectodermal tumor | 9.44e-17 | 10 |
germ cell and embryonal cancer | 1.91e-10 | 22 |
germ cell cancer | 1.91e-10 | 22 |
somatostatinoma | 9.94e-08 | 1 |