FFCP PHASE1:Hg19::chr1:22696471..22696505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22696471..22696505,- | |||
|coexpression_cluster_id=C398 | |||
|description=CAGE_peak_at_chr1:22696471..22696505,- | |description=CAGE_peak_at_chr1:22696471..22696505,- | ||
|id=chr1:22696471..22696505,- | |id=chr1:22696471..22696505,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.49e-79;5!CL:0002321;1.82e-27;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!4.85e-45!10;DOID:169!5.98e-34!6;DOID:3193!4.32e-26!2;DOID:962!4.32e-26!2;DOID:3095!4.27e-21!22;DOID:2994!4.27e-21!22;DOID:1192!6.76e-18!3 | |ontology_enrichment_disease=DOID:171!4.85e-45!10;DOID:169!5.98e-34!6;DOID:3193!4.32e-26!2;DOID:962!4.32e-26!2;DOID:3095!4.27e-21!22;DOID:2994!4.27e-21!22;DOID:1192!6.76e-18!3 | ||
|ontology_enrichment_disease_v019=DOID:169;2.83e-66;6!DOID:3193;2.74e-50;2!DOID:962;2.74e-50;2!DOID:171;2.00e-40;10!DOID:1192;4.27e-34;3!DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22!DOID:3093;1.22e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.83e-66,6;DOID:3193,2.74e-50,2;DOID:962,2.74e-50,2;DOID:171,2.00e-40,10;DOID:1192,4.27e-34,3;DOID:3095,3.41e-19,22;DOID:2994,3.41e-19,22;DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0002146!3.99e-50!1;UBERON:0005623!3.99e-50!1;UBERON:0000013!1.81e-40!5;UBERON:0002410!1.81e-40!5;UBERON:0003714!4.32e-26!2;UBERON:0000010!4.59e-23!8;UBERON:0003978!9.46e-18!3;UBERON:0009751!9.46e-18!3;UBERON:0000946!9.46e-18!3;UBERON:0002523!9.46e-18!3;UBERON:0005983!9.46e-18!3;UBERON:0002165!9.46e-18!3;UBERON:0002062!9.46e-18!3;UBERON:0007280!9.46e-18!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.49e-79;5!UBERON:0002410;3.49e-79;5!UBERON:0003714;2.74e-50;2!UBERON:0000010;9.75e-45;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.49e-79,5;UBERON:0002410,3.49e-79,5;UBERON:0003714,2.74e-50,2;UBERON:0000010,9.75e-45,8 | |||
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|short_description=p@chr1:22696471..22696505,- | |short_description=p@chr1:22696471..22696505,- | ||
}} | }} |
Latest revision as of 04:36, 28 July 2015
Short description: | p@chr1:22696471..22696505, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22696471..22696505, - |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.77e-10 | 41 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.49e-79 | 5 |
autonomic nervous system | 3.49e-79 | 5 |
neural tissue | 2.74e-50 | 2 |
peripheral nervous system | 9.75e-45 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.83e-66 | 6 |
peripheral nerve sheath neoplasm | 2.74e-50 | 2 |
neurofibroma | 2.74e-50 | 2 |
neuroectodermal tumor | 2.00e-40 | 10 |
peripheral nervous system neoplasm | 4.27e-34 | 3 |
germ cell and embryonal cancer | 3.41e-19 | 22 |
germ cell cancer | 3.41e-19 | 22 |
nervous system cancer | 1.22e-09 | 11 |