FFCP PHASE1:Hg19::chr1:221054774..221054789,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:221054774..221054789,- | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_at_chr1:221054774..221054789,- | |description=CAGE_peak_at_chr1:221054774..221054789,- | ||
|id=chr1:221054774..221054789,- | |id=chr1:221054774..221054789,- | ||
|ontology_enrichment_celltype=CL:0000766!2.05e-37!76;CL:0002057!2.76e-36!42;CL:0000763!9.65e-34!112;CL:0000049!9.65e-34!112;CL:0000860!6.49e-33!45;CL:0002009!7.51e-33!65;CL:0000557!7.70e-32!71;CL:0002194!7.36e-31!63;CL:0000576!7.36e-31!63;CL:0000040!7.36e-31!63;CL:0000559!7.36e-31!63;CL:0000839!1.43e-27!70;CL:0000738!6.42e-26!140;CL:0000037!7.62e-24!172;CL:0000566!7.62e-24!172;CL:0002032!3.19e-22!165;CL:0000837!3.19e-22!165;CL:0000988!5.72e-22!182;CL:0002087!1.18e-17!119;CL:0002031!1.97e-16!124;CL:0000094!3.87e-11!8;CL:0000134!2.67e-09!358;CL:0002320!4.95e-09!365;CL:0000081!1.66e-07!11;CL:0000048!2.18e-07!430;CL:0000034!3.97e-07!444;CL:0000219!4.78e-07!390;CL:0000453!4.95e-07!5;CL:0000723!6.16e-07!436 | |ontology_enrichment_celltype=CL:0000766!2.05e-37!76;CL:0002057!2.76e-36!42;CL:0000763!9.65e-34!112;CL:0000049!9.65e-34!112;CL:0000860!6.49e-33!45;CL:0002009!7.51e-33!65;CL:0000557!7.70e-32!71;CL:0002194!7.36e-31!63;CL:0000576!7.36e-31!63;CL:0000040!7.36e-31!63;CL:0000559!7.36e-31!63;CL:0000839!1.43e-27!70;CL:0000738!6.42e-26!140;CL:0000037!7.62e-24!172;CL:0000566!7.62e-24!172;CL:0002032!3.19e-22!165;CL:0000837!3.19e-22!165;CL:0000988!5.72e-22!182;CL:0002087!1.18e-17!119;CL:0002031!1.97e-16!124;CL:0000094!3.87e-11!8;CL:0000134!2.67e-09!358;CL:0002320!4.95e-09!365;CL:0000081!1.66e-07!11;CL:0000048!2.18e-07!430;CL:0000034!3.97e-07!444;CL:0000219!4.78e-07!390;CL:0000453!4.95e-07!5;CL:0000723!6.16e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.56e-60;33!CL:0002057;2.56e-60;33!CL:0000473;8.36e-43;39!CL:0000234;8.36e-43;39!CL:0000576;2.32e-38;48!CL:0000766;5.76e-28;69!CL:0000094;2.77e-17;8!CL:0000763;3.39e-15;100!CL:0000775;1.29e-12;3!CL:0000081;2.21e-12;11!CL:0000453;1.17e-11;5!CL:0002393;4.69e-10;6!CL:0002397;4.69e-10;6!CL:0002087;8.51e-09;104!CL:0000771;1.11e-08;2!CL:0000738;1.18e-08;136!CL:0000988;3.94e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.08e-70,42;CL:0002057,2.08e-70,42;CL:0000473,1.13e-60,48;CL:0000234,1.13e-60,48;CL:0000766,2.11e-60,72;CL:0002009,3.73e-52,61;CL:0002194,1.71e-50,59;CL:0000576,1.71e-50,59;CL:0000040,1.71e-50,59;CL:0000559,1.71e-50,59;CL:0000557,3.36e-50,67;CL:0000763,5.34e-50,108;CL:0000049,5.34e-50,108;CL:0000839,2.03e-44,66;CL:0000738,1.05e-35,136;CL:0002032,1.60e-30,161;CL:0000837,1.60e-30,161;CL:0000037,7.31e-29,168;CL:0000988,6.38e-27,177;CL:0002031,6.30e-23,120;CL:0002087,1.85e-22,115;CL:0000094,2.03e-17,8;CL:0000775,9.81e-13,3;CL:0000081,1.78e-12,11;CL:0000453,1.58e-11,5;CL:0000134,3.02e-10,354;CL:0002320,7.32e-10,361;CL:0000771,8.98e-09,2;CL:0000219,1.63e-08,386;CL:0000034,6.08e-07,441;CL:0000048,7.10e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-49;42!CL:0000049;1.08e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.87e-40!102;UBERON:0003061!9.87e-40!102;UBERON:0002193!3.29e-35!112;UBERON:0002371!2.72e-30!80;UBERON:0001474!1.94e-29!86;UBERON:0004765!2.22e-22!101;UBERON:0001434!2.22e-22!101;UBERON:0002405!6.05e-21!115;UBERON:0003081!3.80e-15!216;UBERON:0002204!4.19e-14!167;UBERON:0000178!5.74e-11!15;UBERON:0000179!5.74e-11!15;UBERON:0000463!5.74e-11!15;UBERON:0002384!7.13e-09!375;UBERON:0007023!4.99e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.44e-15;15!UBERON:0000179;9.44e-15;15!UBERON:0000463;9.44e-15;15!UBERON:0002390;1.79e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.23e-53,98;UBERON:0003061,7.23e-53,98;UBERON:0002193,3.72e-47,108;UBERON:0002371,2.16e-43,76;UBERON:0001474,1.13e-39,82;UBERON:0004765,1.76e-35,90;UBERON:0002405,4.29e-34,93;UBERON:0001434,3.54e-31,100;UBERON:0003081,3.88e-22,203;UBERON:0002204,1.32e-15,167;UBERON:0000178,8.20e-15,15;UBERON:0000179,8.20e-15,15;UBERON:0000463,8.20e-15,15;UBERON:0000926,5.86e-11,315;UBERON:0004120,5.86e-11,315;UBERON:0006603,5.86e-11,315;UBERON:0002384,2.44e-09,371 | |||
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| ||
|short_description=p@chr1:221054774..221054789,- | |short_description=p@chr1:221054774..221054789,- | ||
}} | }} |
Latest revision as of 04:07, 28 July 2015
Short description: | p@chr1:221054774..221054789, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:221054774..221054789, - |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.08e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.08e-70 | 42 |
defensive cell | 1.13e-60 | 48 |
phagocyte | 1.13e-60 | 48 |
myeloid leukocyte | 2.11e-60 | 72 |
macrophage dendritic cell progenitor | 3.73e-52 | 61 |
monopoietic cell | 1.71e-50 | 59 |
monocyte | 1.71e-50 | 59 |
monoblast | 1.71e-50 | 59 |
promonocyte | 1.71e-50 | 59 |
granulocyte monocyte progenitor cell | 3.36e-50 | 67 |
myeloid cell | 5.34e-50 | 108 |
common myeloid progenitor | 5.34e-50 | 108 |
myeloid lineage restricted progenitor cell | 2.03e-44 | 66 |
leukocyte | 1.05e-35 | 136 |
hematopoietic oligopotent progenitor cell | 1.60e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-30 | 161 |
hematopoietic stem cell | 7.31e-29 | 168 |
hematopoietic cell | 6.38e-27 | 177 |
hematopoietic lineage restricted progenitor cell | 6.30e-23 | 120 |
nongranular leukocyte | 1.85e-22 | 115 |
granulocyte | 2.03e-17 | 8 |
neutrophil | 9.81e-13 | 3 |
blood cell | 1.78e-12 | 11 |
Langerhans cell | 1.58e-11 | 5 |
mesenchymal cell | 3.02e-10 | 354 |
connective tissue cell | 7.32e-10 | 361 |
eosinophil | 8.98e-09 | 2 |
motile cell | 1.63e-08 | 386 |
stem cell | 6.08e-07 | 441 |
multi fate stem cell | 7.10e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.23e-53 | 98 |
blood island | 7.23e-53 | 98 |
hemolymphoid system | 3.72e-47 | 108 |
bone marrow | 2.16e-43 | 76 |
bone element | 1.13e-39 | 82 |
skeletal element | 1.76e-35 | 90 |
immune system | 4.29e-34 | 93 |
skeletal system | 3.54e-31 | 100 |
lateral plate mesoderm | 3.88e-22 | 203 |
musculoskeletal system | 1.32e-15 | 167 |
blood | 8.20e-15 | 15 |
haemolymphatic fluid | 8.20e-15 | 15 |
organism substance | 8.20e-15 | 15 |
mesoderm | 5.86e-11 | 315 |
mesoderm-derived structure | 5.86e-11 | 315 |
presumptive mesoderm | 5.86e-11 | 315 |
connective tissue | 2.44e-09 | 371 |