FFCP PHASE1:Hg19::chr12:6665178..6665191,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6665178..6665191,-
|short_description=p3@IFFO1
|description=CAGE_peak_3_at_IFFO1_5end
|association_with_transcript=37bp_to_uc001qpe.1_5end
|EntrezGene=25...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25900 | |EntrezGene=25900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24970 | |HGNC=24970 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_uc001qpe.1_5end | |||
|cluster_id=chr12:6665178..6665191,- | |||
|description=CAGE_peak_3_at_IFFO1_5end | |||
|id=chr12:6665178..6665191,- | |||
|ontology_enrichment_celltype=CL:0000048!2.92e-12!430;CL:0000055!5.42e-12!180;CL:0000723!5.84e-11!436;CL:0000219!2.18e-10!390;CL:0000034!3.83e-10!444;CL:0002009!5.03e-10!65;CL:0002194!7.10e-10!63;CL:0000576!7.10e-10!63;CL:0000040!7.10e-10!63;CL:0000559!7.10e-10!63;CL:0002320!1.11e-09!365;CL:0000557!1.35e-09!71;CL:0000057!1.39e-09!75;CL:0000134!3.42e-09!358;CL:0000839!2.54e-08!70;CL:0002057!7.09e-08!42;CL:0000766!1.98e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.36e-07;39!CL:0000234;6.36e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.75e-09,61;CL:0002194,5.21e-09,59;CL:0000576,5.21e-09,59;CL:0000040,5.21e-09,59;CL:0000559,5.21e-09,59;CL:0000557,4.24e-08,67;CL:0000048,1.88e-07,427;CL:0000473,2.11e-07,48;CL:0000234,2.11e-07,48;CL:0000839,5.33e-07,66;CL:0000723,6.99e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.06e-15!167;UBERON:0001474!1.07e-10!86;UBERON:0002371!1.18e-10!80;UBERON:0004765!2.96e-10!101;UBERON:0001434!2.96e-10!101;UBERON:0002384!4.39e-10!375;UBERON:0002020!1.47e-07!34;UBERON:0003528!1.47e-07!34;UBERON:0002390!1.51e-07!102;UBERON:0003061!1.51e-07!102;UBERON:0001893!2.26e-07!34;UBERON:0000073!2.82e-07!94;UBERON:0001016!2.82e-07!94;UBERON:0003081!3.00e-07!216;UBERON:0001049!4.59e-07!57;UBERON:0005068!4.59e-07!57;UBERON:0006241!4.59e-07!57;UBERON:0007135!4.59e-07!57;UBERON:0002791!5.62e-07!33;UBERON:0001869!5.78e-07!32;UBERON:0002405!8.94e-07!115;UBERON:0001017!9.16e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.54e-13,167;UBERON:0001474,3.39e-10,82;UBERON:0002371,7.62e-10,76;UBERON:0000926,5.30e-09,315;UBERON:0004120,5.30e-09,315;UBERON:0006603,5.30e-09,315;UBERON:0001434,8.51e-09,100;UBERON:0004765,1.48e-08,90 | |||
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| ||
|short_description=p3@IFFO1 | |||
}} | }} |
Latest revision as of 00:33, 20 September 2015
Short description: | p3@IFFO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IFFO1_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_uc001qpe.1_5end |
EntrezGene: | IFFO1 |
HGNC: | 24970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 4.75e-09 | 61 |
monopoietic cell | 5.21e-09 | 59 |
monocyte | 5.21e-09 | 59 |
monoblast | 5.21e-09 | 59 |
promonocyte | 5.21e-09 | 59 |
granulocyte monocyte progenitor cell | 4.24e-08 | 67 |
multi fate stem cell | 1.88e-07 | 427 |
defensive cell | 2.11e-07 | 48 |
phagocyte | 2.11e-07 | 48 |
myeloid lineage restricted progenitor cell | 5.33e-07 | 66 |
somatic stem cell | 6.99e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.54e-13 | 167 |
bone element | 3.39e-10 | 82 |
bone marrow | 7.62e-10 | 76 |
mesoderm | 5.30e-09 | 315 |
mesoderm-derived structure | 5.30e-09 | 315 |
presumptive mesoderm | 5.30e-09 | 315 |
skeletal system | 8.51e-09 | 100 |
skeletal element | 1.48e-08 | 90 |