FFCP PHASE1:Hg19::chr12:66357214..66357233,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:66357214..66357233,+
|short_description=p13@HMGA2
|description=CAGE_peak_13_at_HMGA2_5end
|association_with_transcript=-293bp_to_AK311443_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8091 | |EntrezGene=8091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5009 | |HGNC=5009 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-293bp_to_AK311443_5end | |||
|cluster_id=chr12:66357214..66357233,+ | |||
|coexpression_cluster_id=C1682 | |||
|description=CAGE_peak_13_at_HMGA2_5end | |||
|id=chr12:66357214..66357233,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.68e-19!248;CL:0000220!7.74e-19!246;CL:0000055!9.58e-16!180;CL:0000548!3.57e-15!679;CL:0000004!3.57e-15!679;CL:0000255!3.57e-15!679;CL:0000012!4.44e-15!682;CL:0000066!9.44e-15!254;CL:0002371!1.08e-11!591;CL:0002076!3.32e-11!43;CL:0000144!4.60e-11!625;CL:0000223!7.89e-10!59;CL:0000393!1.13e-09!60;CL:0000211!1.13e-09!60;CL:0000680!6.50e-09!57;CL:0000056!6.50e-09!57;CL:0000355!6.50e-09!57;CL:0000003!8.60e-09!722;CL:0000187!8.94e-08!54;CL:0000183!3.73e-07!59;CL:0000499!6.60e-07!27;CL:0000192!7.61e-07!42;CL:0000514!7.61e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.15e-08,250;CL:0000223,4.49e-07,58;CL:0000066,5.11e-07,253;CL:0002076,9.32e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.21e-07!143;DOID:193!7.32e-07!29;DOID:120!9.96e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!4.26e-11!82;UBERON:0005256!5.69e-10!143;UBERON:0000490!3.60e-09!138;UBERON:0000914!1.12e-08!83;UBERON:0002329!1.12e-08!83;UBERON:0003077!1.12e-08!83;UBERON:0003059!1.12e-08!83;UBERON:0007282!1.12e-08!83;UBERON:0009618!1.12e-08!83;UBERON:0007285!1.12e-08!83;UBERON:0001444!5.74e-08!48;UBERON:0004290!6.57e-08!70;UBERON:0000481!7.78e-08!347;UBERON:0000119!1.68e-07!312;UBERON:0001134!1.99e-07!61;UBERON:0002036!1.99e-07!61;UBERON:0003082!1.99e-07!61;UBERON:0000483!2.90e-07!309;UBERON:0002385!4.31e-07!63;UBERON:0001015!4.31e-07!63;UBERON:0000383!4.31e-07!63;UBERON:0003102!4.55e-07!95;UBERON:0000922!5.77e-07!612;UBERON:0003104!9.70e-07!238;UBERON:0009142!9.70e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;1.14e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001444,9.08e-08,49;UBERON:0000486,9.18e-08,83;UBERON:0000033,7.01e-07,56 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.491467873003018,0,1.74753097704138,0.527533956456907,1.48519623552056,0,5.3786011716142,9.64311244838363,4.38186054232424,3.90346239032406,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.251085279189606,1.06978768047132,0.410502947249729,0.708397031823113,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.724232594804119,0.795285947051099,2.91980922181582,1.98523116044542,4.21285855178871,3.07421749925941,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.838998872419812,2.47606237746061,0,0.516833518338658,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.982297011124877,0,0.900891843866578,0,0,0.732806975721629,0,0,0.436094052142534,0,0.633152558322899,0.926864265692532,0.286836620748814,2.4826786753885,1.12135520028461,0,0.49333509683432,0.933633106199299,0.134710672069688,0.326923806226917,0,1.15235184896,0,5.93104145977609,0.570471821544449,11.6569970830405,0.23486899728753,0.485618833104395,0.561803226808994,1.83738754129404,6.63305313483547,0.103325781175765,0,0.741800787835671,0,0,3.53505839303539,3.503318556415,0,0,1.22595118319608,0.600952235626387,3.28953331164061,0,0.640672166455702,0.847727604638247,0.300091096084402,0.206105058476878,0,0.18611685633159,0.168776332241266,0,0,0.368199594569197,0,0.355009592516614,0.403008392910561,0.169560592310488,2.12586938479627,3.00020732649918,2.00763216772303,2.5614478287215,0.662648841607426,1.39432731443422,1.96956004529204,2.77552935963191,1.45990943630332,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,3.07471096357784,2.05881372358231,0.439001141634502,0,1.80952150340936,10.5550827480724,0.325808305310325,1.03993478527958,2.88662684050547,2.20267769452646,0.587043471179108,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.839910640994298,0.425325291727159,1.16426079513703,0.581267877027924,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0.43596006883328,3.88692914851035,2.06834745212444,0,2.535908257668,1.06375246633948,0,1.28603687131071,1.41849132023278,2.1313774321288,0.285955987316295,0.542621605391443,0.823240336780769,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0.958499421966331,0,0,2.02693829334611,5.75333703141074,0.716243852959582,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.736148950314839,0.500170521059677,0.542530047399471,0.207970861530807,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,3.32112799267718,0.553107505625109,5.90808578382963,0,0,0,0,0,0,0,1.5119514666484,0,0,0,0,0,0.482561763430822,0,4.93471020168498,1.77561725313127,1.8067974323038,3.11552657510173,0.464841513839837,1.57117284469109,3.80962293576241,0.736647911487171,0.34444334449382,1.82091168006717,0.786746489756545,1.80479845162965,7.23944168781499,0.784349769176855,0,5.69978796021529,1.13733384070897,0,2.37507507712353,0,0.541892875087706,1.00337954770971,0.764628819135115,0,2.0148727924996,0.219259876645935,0,1.53870075069834,0.328014645699706,1.30151357865721,0,0,0.082509499920588,2.29706215198469,3.25030123018261,0,2.03008508413456,0.308097234229289,0.307007349452259,1.24052915236078,1.93356440762893,0.725083469571143,2.81247870473133,0.0890320356467374,2.64455864577565,2.88285101047659,2.16941611240793,0.50578890427775,2.78907329578371,0.94443704049192,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0,1.86079184679834,1.58189712359363,0.38126038784765,0.511795582622668,1.71175595213568,0.318203247925937,0,1.2591072030832,0.54907405947211,1.7671860351853,0,3.17020642346017,0.421258456238981,0,1.21856744815642,0,0.272999822815972,0.565621727814851,0,0,1.32687795048244,0.438450885253763,1.15755106853338,1.9676842561399,0.405820753925408,0.92947049429925,0.563391205064483,2.72481569187698,1.08073945114433,2.85336841185,0.354761064070598,0.633322905892992,0,0.75894634753143,0.349934720244983,0.288666338176536,0,0,0,1.72202149068492,1.68471475667626,0.443430153536676,5.28363820476007,0,0,0,0,0,0,0,0,39.6317303882925,0,0.490080431962063,0,0,0,0,0.399158742865633,0,1.05836791361941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0,4.97578139173005,0,1.98895302764489,0,0,0,0,0,1.11308705022906,0,0,0,0,0,0.306806047506464,0,1.24415835064723,0.988551862620595,0,0,0,0,0,0,0,0,0,0,0,4.21035758656349,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,12.6598838716816,3.4278889713421,1.27217764290547,0.216388639742091,0,0,0.611030144933625,0,0,0,0,0,0,0,0.586993856796269,0,0,1.20990716048664,0,0,0.450970258243478,0.518440956986236,0.664653872707185,2.97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| ||
|short_description=p13@HMGA2 | |||
}} | }} |
Latest revision as of 23:42, 19 September 2015
Short description: | p13@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_HMGA2_5end |
Coexpression cluster: | C1682_schwannoma_Fibroblast_hepatoblastoma_Wilms_adrenal_Aortic_meningioma |
Association with transcript: | -293bp_to_AK311443_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.15e-08 | 250 |
endodermal cell | 4.49e-07 | 58 |
epithelial cell | 5.11e-07 | 253 |
endo-epithelial cell | 9.32e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
subdivision of head | 9.08e-08 | 49 |
multilaminar epithelium | 9.18e-08 | 83 |
head | 7.01e-07 | 56 |