FFCP PHASE1:Hg19::chr5:1112141..1112164,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10723 | |EntrezGene=10723 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10915 | |HGNC=10915 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y666 | |UniProt=Q9Y666 | ||
|association_with_transcript=0bp_to_ENST00000264930_5end | |association_with_transcript=0bp_to_ENST00000264930_5end | ||
|cluster_id=chr5:1112141..1112164,- | |||
|description=CAGE_peak_1_at_SLC12A7_5end | |description=CAGE_peak_1_at_SLC12A7_5end | ||
|id=chr5:1112141..1112164,- | |id=chr5:1112141..1112164,- | ||
|ontology_enrichment_celltype=CL:0000557!4.17e-21!71;CL:0002009!2.18e-19!65;CL:0002057!2.89e-19!42;CL:0000839!1.33e-18!70;CL:0002194!3.31e-18!63;CL:0000576!3.31e-18!63;CL:0000040!3.31e-18!63;CL:0000559!3.31e-18!63;CL:0000860!3.65e-17!45;CL:0000766!6.05e-15!76;CL:0000763!2.96e-12!112;CL:0000049!2.96e-12!112;CL:0002031!9.22e-09!124;CL:0002087!7.03e-08!119;CL:0000738!3.32e-07!140;CL:0000988!3.37e-07!182;CL:0000037!8.22e-07!172;CL:0000566!8.22e-07!172 | |ontology_enrichment_celltype=CL:0000557!4.17e-21!71;CL:0002009!2.18e-19!65;CL:0002057!2.89e-19!42;CL:0000839!1.33e-18!70;CL:0002194!3.31e-18!63;CL:0000576!3.31e-18!63;CL:0000040!3.31e-18!63;CL:0000559!3.31e-18!63;CL:0000860!3.65e-17!45;CL:0000766!6.05e-15!76;CL:0000763!2.96e-12!112;CL:0000049!2.96e-12!112;CL:0002031!9.22e-09!124;CL:0002087!7.03e-08!119;CL:0000738!3.32e-07!140;CL:0000988!3.37e-07!182;CL:0000037!8.22e-07!172;CL:0000566!8.22e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.33e-15;39!CL:0000234;4.33e-15;39!CL:0000860;7.02e-15;33!CL:0002057;7.02e-15;33!CL:0000576;6.53e-12;48!CL:0000766;2.48e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.70e-23,67;CL:0000473,2.30e-22,48;CL:0000234,2.30e-22,48;CL:0002009,1.42e-21,61;CL:0000839,1.34e-20,66;CL:0002194,2.47e-20,59;CL:0000576,2.47e-20,59;CL:0000040,2.47e-20,59;CL:0000559,2.47e-20,59;CL:0000860,2.18e-19,42;CL:0002057,2.18e-19,42;CL:0000766,7.51e-17,72;CL:0000763,8.94e-14,108;CL:0000049,8.94e-14,108;CL:0002031,6.34e-10,120;CL:0002087,5.53e-09,115;CL:0000738,2.27e-08,136;CL:0000988,3.00e-08,177;CL:0000037,5.62e-08,168;CL:0002032,2.12e-07,161;CL:0000837,2.12e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.02e-18!112;UBERON:0002405!3.54e-18!115;UBERON:0002390!4.57e-18!102;UBERON:0003061!4.57e-18!102;UBERON:0002371!1.00e-15!80;UBERON:0001474!4.00e-15!86;UBERON:0004765!4.38e-10!101;UBERON:0001434!4.38e-10!101;UBERON:0007023!3.73e-09!115;UBERON:0003081!4.18e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.01e-19,98;UBERON:0003061,1.01e-19,98;UBERON:0002193,1.09e-19,108;UBERON:0002371,2.56e-17,76;UBERON:0002405,3.59e-17,93;UBERON:0001474,1.37e-16,82;UBERON:0004765,2.10e-12,90;UBERON:0001434,6.26e-10,100;UBERON:0007023,3.86e-09,114;UBERON:0003081,4.91e-07,203;UBERON:0005177,8.86e-07,101 | |||
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| ||
|short_description=p1@SLC12A7 | |short_description=p1@SLC12A7 | ||
}} | }} |
Latest revision as of 17:39, 19 September 2015
Short description: | p1@SLC12A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC12A7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264930_5end |
EntrezGene: | SLC12A7 |
HGNC: | 10915 |
UniProt: | Q9Y666 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.70e-23 | 67 |
defensive cell | 2.30e-22 | 48 |
phagocyte | 2.30e-22 | 48 |
macrophage dendritic cell progenitor | 1.42e-21 | 61 |
myeloid lineage restricted progenitor cell | 1.34e-20 | 66 |
monopoietic cell | 2.47e-20 | 59 |
monocyte | 2.47e-20 | 59 |
monoblast | 2.47e-20 | 59 |
promonocyte | 2.47e-20 | 59 |
classical monocyte | 2.18e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.18e-19 | 42 |
myeloid leukocyte | 7.51e-17 | 72 |
myeloid cell | 8.94e-14 | 108 |
common myeloid progenitor | 8.94e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 6.34e-10 | 120 |
nongranular leukocyte | 5.53e-09 | 115 |
leukocyte | 2.27e-08 | 136 |
hematopoietic cell | 3.00e-08 | 177 |
hematopoietic stem cell | 5.62e-08 | 168 |
hematopoietic oligopotent progenitor cell | 2.12e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.01e-19 | 98 |
blood island | 1.01e-19 | 98 |
hemolymphoid system | 1.09e-19 | 108 |
bone marrow | 2.56e-17 | 76 |
immune system | 3.59e-17 | 93 |
bone element | 1.37e-16 | 82 |
skeletal element | 2.10e-12 | 90 |
skeletal system | 6.26e-10 | 100 |
adult organism | 3.86e-09 | 114 |
lateral plate mesoderm | 4.91e-07 | 203 |
trunk region element | 8.86e-07 | 101 |