FFCP PHASE1:Hg19::chr5:1042544..1042553,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:1042544..1042553,+ | |||
|coexpression_cluster_id=C1947 | |||
|description=CAGE_peak_at_chr5:1042544..1042553,+ | |description=CAGE_peak_at_chr5:1042544..1042553,+ | ||
|id=chr5:1042544..1042553,+ | |id=chr5:1042544..1042553,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000487;2.74e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,2.74e-50,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;7.14e-26;4!DOID:1325;1.91e-15;7!DOID:3904;1.91e-15;7!DOID:3905;2.45e-12;9!DOID:1324;5.93e-08;15!DOID:0050615;1.54e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.14e-26,4;DOID:1325,1.91e-15,7;DOID:3904,1.91e-15,7;DOID:3905,2.45e-12,9;DOID:1324,5.93e-08,15;DOID:0050615,1.54e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0002619!5.04e-15!22;UBERON:0001950!3.64e-13!20;UBERON:0000956!4.10e-13!25;UBERON:0000203!4.10e-13!25;UBERON:0001869!2.28e-12!32;UBERON:0002791!5.95e-12!33;UBERON:0002020!1.47e-11!34;UBERON:0003528!1.47e-11!34;UBERON:0001893!1.47e-11!34;UBERON:0001871!8.23e-10!7;UBERON:0002780!2.47e-09!41;UBERON:0001890!2.47e-09!41;UBERON:0006240!2.47e-09!41;UBERON:0003080!4.49e-09!42;UBERON:0001049!1.05e-07!57;UBERON:0005068!1.05e-07!57;UBERON:0006241!1.05e-07!57;UBERON:0007135!1.05e-07!57;UBERON:0002771!1.07e-07!3;UBERON:0002616!2.21e-07!59;UBERON:0000955!4.08e-07!69;UBERON:0006238!4.08e-07!69;UBERON:0007023!5.13e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.16e-10;11!UBERON:0010147;2.16e-10;11!UBERON:0003937;1.22e-09;12!UBERON:0005399;1.22e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,5.76e-12,37;UBERON:0002367,2.16e-10,11;UBERON:0010147,2.16e-10,11;UBERON:0009846,2.16e-10,11;UBERON:0003353,2.16e-10,11;UBERON:0004902,2.16e-10,11;UBERON:0003820,2.16e-10,11;UBERON:0009847,2.16e-10,11;UBERON:0005157,1.08e-09,47;UBERON:0003937,1.22e-09,12;UBERON:0005399,1.22e-09,12;UBERON:0000162,1.86e-08,14;UBERON:0001353,1.86e-08,14;UBERON:0000163,1.86e-08,14;UBERON:0006866,1.86e-08,14;UBERON:0000164,1.86e-08,14;UBERON:0000931,1.86e-08,14;UBERON:0004122,5.55e-08,15 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96951407102797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,1.1294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946629373159108,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0.18378979906969,0,0,0.267964130156178,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96951407102797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,1.1294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946629373159108,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0.18378979906969,0,0,0.267964130156178,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:1042544..1042553,+ | |short_description=p@chr5:1042544..1042553,+ | ||
}} | }} |
Latest revision as of 08:26, 30 July 2015
Short description: | p@chr5:1042544..1042553, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:1042544..1042553, + |
Coexpression cluster: | C1947_Smooth_synovial_small_gastric_parietal_Cardiac_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 2.74e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelial bud | 5.76e-12 | 37 |
prostate gland | 2.16e-10 | 11 |
male accessory sex gland | 2.16e-10 | 11 |
embryonic cloacal epithelium | 2.16e-10 | 11 |
epithelium of hindgut | 2.16e-10 | 11 |
urogenital sinus epithelium | 2.16e-10 | 11 |
prostate bud | 2.16e-10 | 11 |
prostate field | 2.16e-10 | 11 |
epithelial fold | 1.08e-09 | 47 |
sex gland | 1.22e-09 | 12 |
male reproductive gland | 1.22e-09 | 12 |
cloaca | 1.86e-08 | 14 |
anal region | 1.86e-08 | 14 |
embryonic cloaca | 1.86e-08 | 14 |
terminal part of digestive tract | 1.86e-08 | 14 |
primitive urogenital sinus | 1.86e-08 | 14 |
proctodeum | 1.86e-08 | 14 |
genitourinary system | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.14e-26 | 4 |
bronchus cancer | 1.91e-15 | 7 |
bronchogenic carcinoma | 1.91e-15 | 7 |
lung carcinoma | 2.45e-12 | 9 |
lung cancer | 5.93e-08 | 15 |
respiratory system cancer | 1.54e-07 | 16 |