FFCP PHASE1:Hg19::chr4:89744365..89744398,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10144 | |EntrezGene=10144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19367 | |HGNC=19367 | ||
|TSSclassifier=strong | |||
|UniProt=O94988 | |UniProt=O94988 | ||
|association_with_transcript=0bp_to_ENST00000503556,ENST00000513837_5end | |association_with_transcript=0bp_to_ENST00000503556,ENST00000513837_5end | ||
|cluster_id=chr4:89744365..89744398,- | |||
|description=CAGE_peak_3_at_FAM13A_5end | |description=CAGE_peak_3_at_FAM13A_5end | ||
|id=chr4:89744365..89744398,- | |id=chr4:89744365..89744398,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-37!115;UBERON:0001049!1.06e-15!57;UBERON:0005068!1.06e-15!57;UBERON:0006241!1.06e-15!57;UBERON:0007135!1.06e-15!57;UBERON:0002616!2.92e-14!59;UBERON:0003080!4.05e-14!42;UBERON:0002780!1.45e-13!41;UBERON:0001890!1.45e-13!41;UBERON:0006240!1.45e-13!41;UBERON:0002020!5.22e-12!34;UBERON:0003528!5.22e-12!34;UBERON:0001017!6.74e-12!82;UBERON:0001893!7.33e-12!34;UBERON:0002791!1.54e-11!33;UBERON:0005743!1.91e-11!86;UBERON:0001869!3.81e-11!32;UBERON:0003075!7.20e-11!86;UBERON:0007284!7.20e-11!86;UBERON:0000955!9.84e-10!69;UBERON:0006238!9.84e-10!69;UBERON:0000956!1.04e-09!25;UBERON:0000203!1.04e-09!25;UBERON:0000073!1.71e-09!94;UBERON:0001016!1.71e-09!94;UBERON:0002619!2.11e-09!22;UBERON:0003056!2.62e-09!61;UBERON:0002346!4.48e-09!90;UBERON:0001950!7.40e-09!20;UBERON:0000153!1.33e-07!129;UBERON:0007811!1.33e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.11e-10;32!UBERON:0007023;1.11e-10;114!UBERON:0001893;1.17e-10;34!UBERON:0002780;1.23e-10;41!UBERON:0001890;1.23e-10;41!UBERON:0003528;1.27e-10;34!UBERON:0002020;1.27e-10;34!UBERON:0001869;1.29e-10;32!UBERON:0000956;3.23e-10;25!UBERON:0000203;3.23e-10;25!UBERON:0002619;7.48e-10;22!UBERON:0001950;2.45e-09;20!UBERON:0000073;5.34e-09;53!UBERON:0002616;5.34e-09;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.37e-38,114;UBERON:0001049,1.26e-15,56;UBERON:0005068,1.26e-15,56;UBERON:0006241,1.26e-15,56;UBERON:0007135,1.26e-15,56;UBERON:0000073,1.15e-14,53;UBERON:0002616,1.15e-14,53;UBERON:0002780,3.44e-14,41;UBERON:0001890,3.44e-14,41;UBERON:0003080,3.44e-14,41;UBERON:0006240,3.44e-14,41;UBERON:0003528,1.49e-12,34;UBERON:0002020,1.49e-12,34;UBERON:0001893,2.13e-12,34;UBERON:0002791,7.76e-12,32;UBERON:0011216,9.37e-12,223;UBERON:0003075,1.01e-11,82;UBERON:0007284,1.01e-11,82;UBERON:0001869,1.21e-11,32;UBERON:0001017,1.31e-11,81;UBERON:0000956,3.89e-10,25;UBERON:0000203,3.89e-10,25;UBERON:0002346,6.55e-10,86;UBERON:0003056,8.11e-10,61;UBERON:0002619,8.24e-10,22;UBERON:0001016,1.46e-09,89;UBERON:0000955,1.51e-09,68;UBERON:0006238,1.51e-09,68;UBERON:0001950,3.08e-09,20 | |||
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| ||
|short_description=p3@FAM13A | |short_description=p3@FAM13A | ||
}} | }} |
Latest revision as of 08:15, 19 September 2015
Short description: | p3@FAM13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM13A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503556, ENST00000513837_5end |
EntrezGene: | FAM13A |
HGNC: | 19367 |
UniProt: | O94988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.37e-38 | 114 |
neural tube | 1.26e-15 | 56 |
neural rod | 1.26e-15 | 56 |
future spinal cord | 1.26e-15 | 56 |
neural keel | 1.26e-15 | 56 |
regional part of nervous system | 1.15e-14 | 53 |
regional part of brain | 1.15e-14 | 53 |
regional part of forebrain | 3.44e-14 | 41 |
forebrain | 3.44e-14 | 41 |
anterior neural tube | 3.44e-14 | 41 |
future forebrain | 3.44e-14 | 41 |
brain grey matter | 1.49e-12 | 34 |
gray matter | 1.49e-12 | 34 |
telencephalon | 2.13e-12 | 34 |
regional part of telencephalon | 7.76e-12 | 32 |
organ system subdivision | 9.37e-12 | 223 |
neural plate | 1.01e-11 | 82 |
presumptive neural plate | 1.01e-11 | 82 |
cerebral hemisphere | 1.21e-11 | 32 |
central nervous system | 1.31e-11 | 81 |
cerebral cortex | 3.89e-10 | 25 |
pallium | 3.89e-10 | 25 |
neurectoderm | 6.55e-10 | 86 |
pre-chordal neural plate | 8.11e-10 | 61 |
regional part of cerebral cortex | 8.24e-10 | 22 |
nervous system | 1.46e-09 | 89 |
brain | 1.51e-09 | 68 |
future brain | 1.51e-09 | 68 |
neocortex | 3.08e-09 | 20 |