FFCP PHASE1:Hg19::chr1:205744205..205744244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8934 | |EntrezGene=8934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9789 | |HGNC=9789 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000492534_5end | |association_with_transcript=34bp_to_ENST00000492534_5end | ||
|cluster_id=chr1:205744205..205744244,- | |||
|coexpression_cluster_id=C3928 | |||
|description=CAGE_peak_2_at_RAB7L1_5end | |description=CAGE_peak_2_at_RAB7L1_5end | ||
|id=chr1:205744205..205744244,- | |id=chr1:205744205..205744244,- | ||
|ontology_enrichment_celltype=CL:0000738!5.14e-50!140;CL:0002087!5.76e-43!119;CL:0000037!1.45e-42!172;CL:0000566!1.45e-42!172;CL:0000988!8.21e-42!182;CL:0002031!9.33e-41!124;CL:0002032!1.36e-39!165;CL:0000837!1.36e-39!165;CL:0000542!1.34e-23!53;CL:0000051!1.34e-23!53;CL:0000838!2.14e-23!52;CL:0000766!1.78e-20!76;CL:0002057!2.35e-19!42;CL:0002009!4.87e-18!65;CL:0000557!7.12e-18!71;CL:0002194!2.87e-17!63;CL:0000576!2.87e-17!63;CL:0000040!2.87e-17!63;CL:0000559!2.87e-17!63;CL:0000763!6.46e-17!112;CL:0000049!6.46e-17!112;CL:0000839!1.27e-16!70;CL:0000860!3.83e-16!45;CL:0000084!1.96e-12!25;CL:0000827!1.96e-12!25;CL:0000791!3.72e-12!18;CL:0000789!3.72e-12!18;CL:0002420!3.72e-12!18;CL:0002419!3.72e-12!18;CL:0000790!3.72e-12!18;CL:0000134!4.28e-11!358;CL:0000945!3.24e-10!24;CL:0000826!3.24e-10!24;CL:0002320!4.10e-10!365;CL:0000625!7.91e-09!11;CL:0000236!1.71e-07!14 | |ontology_enrichment_celltype=CL:0000738!5.14e-50!140;CL:0002087!5.76e-43!119;CL:0000037!1.45e-42!172;CL:0000566!1.45e-42!172;CL:0000988!8.21e-42!182;CL:0002031!9.33e-41!124;CL:0002032!1.36e-39!165;CL:0000837!1.36e-39!165;CL:0000542!1.34e-23!53;CL:0000051!1.34e-23!53;CL:0000838!2.14e-23!52;CL:0000766!1.78e-20!76;CL:0002057!2.35e-19!42;CL:0002009!4.87e-18!65;CL:0000557!7.12e-18!71;CL:0002194!2.87e-17!63;CL:0000576!2.87e-17!63;CL:0000040!2.87e-17!63;CL:0000559!2.87e-17!63;CL:0000763!6.46e-17!112;CL:0000049!6.46e-17!112;CL:0000839!1.27e-16!70;CL:0000860!3.83e-16!45;CL:0000084!1.96e-12!25;CL:0000827!1.96e-12!25;CL:0000791!3.72e-12!18;CL:0000789!3.72e-12!18;CL:0002420!3.72e-12!18;CL:0002419!3.72e-12!18;CL:0000790!3.72e-12!18;CL:0000134!4.28e-11!358;CL:0000945!3.24e-10!24;CL:0000826!3.24e-10!24;CL:0002320!4.10e-10!365;CL:0000625!7.91e-09!11;CL:0000236!1.71e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002087;2.89e-18;104!CL:0000860;3.43e-18;33!CL:0002057;3.43e-18;33!CL:0000542;1.03e-17;53!CL:0000576;7.37e-17;48!CL:0000791;2.42e-16;18!CL:0000789;2.42e-16;18!CL:0002419;2.42e-16;18!CL:0000084;3.71e-16;25!CL:0000473;2.60e-15;39!CL:0000234;2.60e-15;39!CL:0000738;2.15e-14;136!CL:0000766;4.92e-13;69!CL:0000945;7.72e-13;24!CL:0000625;1.02e-11;11!CL:0000988;5.20e-10;177!CL:0000236;2.78e-09;13!CL:0000451;4.44e-07;10!CL:0000763;9.93e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.71e-69,136;CL:0002087,1.05e-61,115;CL:0002031,5.88e-56,120;CL:0000037,3.84e-55,168;CL:0000988,3.87e-55,177;CL:0002032,8.52e-52,161;CL:0000837,8.52e-52,161;CL:0000542,1.05e-30,53;CL:0000051,1.05e-30,53;CL:0000838,2.04e-30,52;CL:0000766,5.27e-30,72;CL:0002009,8.78e-28,61;CL:0002194,1.12e-26,59;CL:0000576,1.12e-26,59;CL:0000040,1.12e-26,59;CL:0000559,1.12e-26,59;CL:0000860,2.16e-26,42;CL:0002057,2.16e-26,42;CL:0000557,3.00e-26,67;CL:0000473,8.38e-26,48;CL:0000234,8.38e-26,48;CL:0000839,2.15e-23,66;CL:0000763,1.10e-21,108;CL:0000049,1.10e-21,108;CL:0000791,2.47e-16,18;CL:0000789,2.47e-16,18;CL:0002420,2.47e-16,18;CL:0002419,2.47e-16,18;CL:0000790,2.47e-16,18;CL:0000084,6.21e-16,25;CL:0000827,6.21e-16,25;CL:0000945,7.32e-13,24;CL:0000826,7.32e-13,24;CL:0000134,3.33e-12,354;CL:0000625,1.07e-11,11;CL:0002320,3.55e-11,361;CL:0000236,6.73e-10,14;CL:0000219,5.21e-08,386;CL:0002393,8.17e-08,9;CL:0002397,8.17e-08,9;CL:0000451,4.54e-07,10;CL:0000094,9.75e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.19e-19;42!CL:0000051;1.03e-17;53!CL:0000790;2.42e-16;18!CL:0000049;8.58e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.01e-25!112;UBERON:0002390!5.96e-25!102;UBERON:0003061!5.96e-25!102;UBERON:0002371!2.77e-14!80;UBERON:0002405!3.73e-14!115;UBERON:0001474!3.49e-12!86;UBERON:0004765!6.52e-11!101;UBERON:0001434!6.52e-11!101;UBERON:0000178!1.46e-10!15;UBERON:0000179!1.46e-10!15;UBERON:0000463!1.46e-10!15;UBERON:0003081!2.51e-09!216;UBERON:0002384!5.69e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.26e-14;15!UBERON:0000179;4.26e-14;15!UBERON:0000463;4.26e-14;15!UBERON:0002390;3.34e-09;32!UBERON:0002193;3.44e-07;42 | |||
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| ||
|short_description=p2@RAB7L1 | |short_description=p2@RAB7L1 | ||
}} | }} |
Latest revision as of 03:57, 20 September 2015
Short description: | p2@RAB7L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB7L1_5end |
Coexpression cluster: | C3928_cord_CD8_Natural_small_CD19_CD4_Whole |
Association with transcript: | 34bp_to_ENST00000492534_5end |
EntrezGene: | RAB7L1 |
HGNC: | 9789 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.26e-39 | 108 |
hematopoietic system | 4.97e-38 | 98 |
blood island | 4.97e-38 | 98 |
immune system | 4.83e-27 | 93 |
bone marrow | 2.31e-22 | 76 |
bone element | 3.82e-19 | 82 |
skeletal element | 5.73e-18 | 90 |
skeletal system | 2.25e-15 | 100 |
blood | 4.12e-14 | 15 |
haemolymphatic fluid | 4.12e-14 | 15 |
organism substance | 4.12e-14 | 15 |
lateral plate mesoderm | 1.02e-11 | 203 |
connective tissue | 4.25e-10 | 371 |