FFCP PHASE1:Hg19::chr4:83350580..83350600,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9987 | |EntrezGene=9987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5037 | |HGNC=5037 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000349655_5end | |association_with_transcript=0bp_to_ENST00000349655_5end | ||
|cluster_id=chr4:83350580..83350600,- | |||
|description=CAGE_peak_1_at_HNRPDL_5end | |description=CAGE_peak_1_at_HNRPDL_5end | ||
|id=chr4:83350580..83350600,- | |id=chr4:83350580..83350600,- | ||
|ontology_enrichment_celltype=CL:0000542!3.48e-20!53;CL:0000051!3.48e-20!53;CL:0000838!5.84e-20!52;CL:0000037!9.96e-17!172;CL:0000566!9.96e-17!172;CL:0000988!5.32e-15!182;CL:0002032!2.67e-14!165;CL:0000837!2.67e-14!165;CL:0000738!1.53e-13!140;CL:0002087!6.45e-12!119;CL:0002031!1.66e-11!124;CL:0000945!1.52e-10!24;CL:0000826!1.52e-10!24;CL:0000084!2.53e-09!25;CL:0000827!2.53e-09!25;CL:0000236!2.66e-09!14;CL:0000791!3.66e-09!18;CL:0000789!3.66e-09!18;CL:0002420!3.66e-09!18;CL:0002419!3.66e-09!18;CL:0000790!3.66e-09!18 | |ontology_enrichment_celltype=CL:0000542!3.48e-20!53;CL:0000051!3.48e-20!53;CL:0000838!5.84e-20!52;CL:0000037!9.96e-17!172;CL:0000566!9.96e-17!172;CL:0000988!5.32e-15!182;CL:0002032!2.67e-14!165;CL:0000837!2.67e-14!165;CL:0000738!1.53e-13!140;CL:0002087!6.45e-12!119;CL:0002031!1.66e-11!124;CL:0000945!1.52e-10!24;CL:0000826!1.52e-10!24;CL:0000084!2.53e-09!25;CL:0000827!2.53e-09!25;CL:0000236!2.66e-09!14;CL:0000791!3.66e-09!18;CL:0000789!3.66e-09!18;CL:0002420!3.66e-09!18;CL:0002419!3.66e-09!18;CL:0000790!3.66e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.90e-12;53!CL:0000945;1.53e-10;24!CL:0000084;2.56e-09;25!CL:0000791;3.64e-09;18!CL:0000789;3.64e-09;18!CL:0002419;3.64e-09;18!CL:0000236;6.14e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.48e-20,53;CL:0000051,3.48e-20,53;CL:0000838,5.84e-20,52;CL:0000037,3.90e-17,168;CL:0000988,8.28e-16,177;CL:0002032,1.14e-14,161;CL:0000837,1.14e-14,161;CL:0000738,5.89e-14,136;CL:0002087,2.39e-12,115;CL:0002031,6.62e-12,120;CL:0000945,1.52e-10,24;CL:0000826,1.52e-10,24;CL:0000084,2.53e-09,25;CL:0000827,2.53e-09,25;CL:0000236,2.66e-09,14;CL:0000791,3.66e-09,18;CL:0000789,3.66e-09,18;CL:0002420,3.66e-09,18;CL:0002419,3.66e-09,18;CL:0000790,3.66e-09,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.90e-12;53!CL:0000790;3.64e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.54e-10!82;UBERON:0000073!2.13e-09!94;UBERON:0001016!2.13e-09!94;UBERON:0005743!7.86e-09!86;UBERON:0002020!7.08e-08!34;UBERON:0003528!7.08e-08!34;UBERON:0001049!9.69e-08!57;UBERON:0005068!9.69e-08!57;UBERON:0006241!9.69e-08!57;UBERON:0007135!9.69e-08!57;UBERON:0002780!1.99e-07!41;UBERON:0001890!1.99e-07!41;UBERON:0006240!1.99e-07!41;UBERON:0002791!2.47e-07!33;UBERON:0001893!2.58e-07!34;UBERON:0003080!6.04e-07!42;UBERON:0001869!8.33e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;7.82e-07;32!UBERON:0003528;8.30e-07;34!UBERON:0002020;8.30e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.41e-11,89;UBERON:0001017,2.55e-10,81;UBERON:0001049,3.59e-08,56;UBERON:0005068,3.59e-08,56;UBERON:0006241,3.59e-08,56;UBERON:0007135,3.59e-08,56;UBERON:0003528,7.08e-08,34;UBERON:0002020,7.08e-08,34;UBERON:0002780,1.99e-07,41;UBERON:0001890,1.99e-07,41;UBERON:0003080,1.99e-07,41;UBERON:0006240,1.99e-07,41;UBERON:0001893,2.58e-07,34;UBERON:0000073,2.84e-07,53;UBERON:0002616,2.84e-07,53;UBERON:0002791,3.27e-07,32;UBERON:0001869,8.33e-07,32 | |||
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| ||
|short_description=p1@HNRPDL | |short_description=p1@HNRPDL | ||
}} | }} |
Latest revision as of 00:40, 19 September 2015
Short description: | p1@HNRPDL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HNRPDL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000349655_5end |
EntrezGene: | HNRPDL |
HGNC: | 5037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.48e-20 | 53 |
common lymphoid progenitor | 3.48e-20 | 53 |
lymphoid lineage restricted progenitor cell | 5.84e-20 | 52 |
hematopoietic stem cell | 3.90e-17 | 168 |
hematopoietic cell | 8.28e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.14e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-14 | 161 |
leukocyte | 5.89e-14 | 136 |
nongranular leukocyte | 2.39e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 6.62e-12 | 120 |
lymphocyte of B lineage | 1.52e-10 | 24 |
pro-B cell | 1.52e-10 | 24 |
T cell | 2.53e-09 | 25 |
pro-T cell | 2.53e-09 | 25 |
B cell | 2.66e-09 | 14 |
mature alpha-beta T cell | 3.66e-09 | 18 |
alpha-beta T cell | 3.66e-09 | 18 |
immature T cell | 3.66e-09 | 18 |
mature T cell | 3.66e-09 | 18 |
immature alpha-beta T cell | 3.66e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.41e-11 | 89 |
central nervous system | 2.55e-10 | 81 |
neural tube | 3.59e-08 | 56 |
neural rod | 3.59e-08 | 56 |
future spinal cord | 3.59e-08 | 56 |
neural keel | 3.59e-08 | 56 |
brain grey matter | 7.08e-08 | 34 |
gray matter | 7.08e-08 | 34 |
regional part of forebrain | 1.99e-07 | 41 |
forebrain | 1.99e-07 | 41 |
anterior neural tube | 1.99e-07 | 41 |
future forebrain | 1.99e-07 | 41 |
telencephalon | 2.58e-07 | 34 |
regional part of nervous system | 2.84e-07 | 53 |
regional part of brain | 2.84e-07 | 53 |
regional part of telencephalon | 3.27e-07 | 32 |
cerebral hemisphere | 8.33e-07 | 32 |