FFCP PHASE1:Hg19::chr1:204381318..204381339,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:204381318..204381339,+ | |||
|coexpression_cluster_id=C2353 | |||
|description=CAGE_peak_at_chr1:204381318..204381339,+ | |description=CAGE_peak_at_chr1:204381318..204381339,+ | ||
|id=chr1:204381318..204381339,+ | |id=chr1:204381318..204381339,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.61e-41!140;CL:0000860!8.89e-36!45;CL:0002031!9.81e-35!124;CL:0000037!1.80e-34!172;CL:0000566!1.80e-34!172;CL:0000988!8.55e-34!182;CL:0002087!2.28e-33!119;CL:0002057!6.93e-33!42;CL:0000766!1.38e-30!76;CL:0002032!1.94e-30!165;CL:0000837!1.94e-30!165;CL:0000839!2.75e-28!70;CL:0000557!3.60e-26!71;CL:0002194!4.13e-25!63;CL:0000576!4.13e-25!63;CL:0000040!4.13e-25!63;CL:0000559!4.13e-25!63;CL:0002009!5.42e-24!65;CL:0000763!1.58e-21!112;CL:0000049!1.58e-21!112;CL:0000134!7.94e-13!358;CL:0002320!3.77e-12!365;CL:0000219!8.33e-10!390;CL:0000048!2.11e-09!430;CL:0000723!5.78e-09!436;CL:0000034!6.15e-09!444;CL:0000838!1.22e-08!52;CL:0000542!2.27e-08!53;CL:0000051!2.27e-08!53;CL:0002393!3.99e-08!9;CL:0002397!3.99e-08!9;CL:0000791!8.53e-08!18;CL:0000789!8.53e-08!18;CL:0002420!8.53e-08!18;CL:0002419!8.53e-08!18;CL:0000790!8.53e-08!18;CL:0000624!1.84e-07!6;CL:0000623!9.29e-07!3;CL:0000825!9.29e-07!3;CL:0000767!9.81e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.61e-41!140;CL:0000860!8.89e-36!45;CL:0002031!9.81e-35!124;CL:0000037!1.80e-34!172;CL:0000566!1.80e-34!172;CL:0000988!8.55e-34!182;CL:0002087!2.28e-33!119;CL:0002057!6.93e-33!42;CL:0000766!1.38e-30!76;CL:0002032!1.94e-30!165;CL:0000837!1.94e-30!165;CL:0000839!2.75e-28!70;CL:0000557!3.60e-26!71;CL:0002194!4.13e-25!63;CL:0000576!4.13e-25!63;CL:0000040!4.13e-25!63;CL:0000559!4.13e-25!63;CL:0002009!5.42e-24!65;CL:0000763!1.58e-21!112;CL:0000049!1.58e-21!112;CL:0000134!7.94e-13!358;CL:0002320!3.77e-12!365;CL:0000219!8.33e-10!390;CL:0000048!2.11e-09!430;CL:0000723!5.78e-09!436;CL:0000034!6.15e-09!444;CL:0000838!1.22e-08!52;CL:0000542!2.27e-08!53;CL:0000051!2.27e-08!53;CL:0002393!3.99e-08!9;CL:0002397!3.99e-08!9;CL:0000791!8.53e-08!18;CL:0000789!8.53e-08!18;CL:0002420!8.53e-08!18;CL:0002419!8.53e-08!18;CL:0000790!8.53e-08!18;CL:0000624!1.84e-07!6;CL:0000623!9.29e-07!3;CL:0000825!9.29e-07!3;CL:0000767!9.81e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000767;2.28e-18;3!CL:0000623;2.28e-18;3!CL:0000860;3.19e-14;33!CL:0002057;3.19e-14;33!CL:0000097;1.00e-11;5!CL:0000473;7.69e-09;39!CL:0000234;7.69e-09;39!CL:0000576;1.15e-08;48!CL:0000766;4.71e-08;69!CL:0000791;9.06e-08;18!CL:0000789;9.06e-08;18!CL:0002419;9.06e-08;18!CL:0000094;3.50e-07;8!CL:0000037;5.60e-07;1!CL:0001024;5.60e-07;1!CL:0002087;5.79e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.62e-25,136;CL:0002031,2.35e-22,120;CL:0000766,8.89e-22,72;CL:0000037,3.33e-21,168;CL:0002032,1.47e-20,161;CL:0000837,1.47e-20,161;CL:0000988,7.57e-20,177;CL:0000623,1.03e-18,3;CL:0000825,1.03e-18,3;CL:0000767,1.23e-18,3;CL:0002087,3.73e-17,115;CL:0000839,3.95e-16,66;CL:0000557,7.59e-16,67;CL:0000860,3.17e-14,42;CL:0002057,3.17e-14,42;CL:0000763,2.57e-13,108;CL:0000049,2.57e-13,108;CL:0000473,3.41e-12,48;CL:0000234,3.41e-12,48;CL:0000097,1.01e-11,5;CL:0002028,1.01e-11,5;CL:0002194,3.26e-11,59;CL:0000576,3.26e-11,59;CL:0000040,3.26e-11,59;CL:0000559,3.26e-11,59;CL:0002009,8.89e-11,61;CL:0000791,1.00e-07,18;CL:0000789,1.00e-07,18;CL:0002420,1.00e-07,18;CL:0002419,1.00e-07,18;CL:0000790,1.00e-07,18;CL:0000838,1.67e-07,52;CL:0000542,2.47e-07,53;CL:0000051,2.47e-07,53;CL:0000094,2.81e-07,8;CL:0000134,3.95e-07,354;CL:0002320,6.99e-07,361;CL:0001024,7.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;3.95e-09;42!CL:0000790;9.06e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.95e-25!102;UBERON:0003061!5.95e-25!102;UBERON:0001474!1.42e-24!86;UBERON:0002371!2.33e-23!80;UBERON:0002193!2.05e-21!112;UBERON:0004765!4.53e-20!101;UBERON:0001434!4.53e-20!101;UBERON:0002405!3.72e-16!115;UBERON:0002384!3.10e-11!375;UBERON:0002204!6.97e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!5.95e-25!102;UBERON:0003061!5.95e-25!102;UBERON:0001474!1.42e-24!86;UBERON:0002371!2.33e-23!80;UBERON:0002193!2.05e-21!112;UBERON:0004765!4.53e-20!101;UBERON:0001434!4.53e-20!101;UBERON:0002405!3.72e-16!115;UBERON:0002384!3.10e-11!375;UBERON:0002204!6.97e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-15,76;UBERON:0001474,2.87e-14,82;UBERON:0004765,1.01e-12,90;UBERON:0002405,3.29e-12,93;UBERON:0002390,2.00e-11,98;UBERON:0003061,2.00e-11,98;UBERON:0001434,3.91e-11,100;UBERON:0002193,4.47e-10,108 | |||
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|short_description=p@chr1:204381318..204381339,+ | |short_description=p@chr1:204381318..204381339,+ | ||
}} | }} |
Latest revision as of 02:38, 28 July 2015
Short description: | p@chr1:204381318..204381339, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:204381318..204381339, + |
Coexpression cluster: | C2353_Mast_immature_Natural_CD8_CD4_CD14_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-15 | 76 |
bone element | 2.87e-14 | 82 |
skeletal element | 1.01e-12 | 90 |
immune system | 3.29e-12 | 93 |
hematopoietic system | 2.00e-11 | 98 |
blood island | 2.00e-11 | 98 |
skeletal system | 3.91e-11 | 100 |
hemolymphoid system | 4.47e-10 | 108 |