FFCP PHASE1:Hg19::chr4:815301..815303,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:815301..815303,- | |||
|coexpression_cluster_id=C423 | |||
|description=CAGE_peak_at_chr4:815301..815303,- | |description=CAGE_peak_at_chr4:815301..815303,- | ||
|id=chr4:815301..815303,- | |id=chr4:815301..815303,- | ||
|ontology_enrichment_celltype=CL:0000135!1.03e-26!3;CL:0000386!1.03e-26!3;CL:0000388!1.03e-26!3;CL:0000136!1.30e-20!15;CL:0002617!1.71e-18!2;CL:0000153!1.25e-15!9;CL:0000447!1.25e-15!9;CL:0000499!5.19e-15!27;CL:0002580!5.19e-13!3;CL:0002615!1.26e-12!3;CL:0000214!1.33e-12!3;CL:0000327!4.02e-10!14;CL:0000630!2.71e-09!9;CL:0000325!1.19e-07!39;CL:0002334!2.98e-07!12 | |ontology_enrichment_celltype=CL:0000135!1.03e-26!3;CL:0000386!1.03e-26!3;CL:0000388!1.03e-26!3;CL:0000136!1.30e-20!15;CL:0002617!1.71e-18!2;CL:0000153!1.25e-15!9;CL:0000447!1.25e-15!9;CL:0000499!5.19e-15!27;CL:0002580!5.19e-13!3;CL:0002615!1.26e-12!3;CL:0000214!1.33e-12!3;CL:0000327!4.02e-10!14;CL:0000630!2.71e-09!9;CL:0000325!1.19e-07!39;CL:0002334!2.98e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.28e-28;13!CL:0002617;4.66e-21;2!CL:0002580;1.22e-14;3!CL:0002521;1.60e-14;3!CL:0002615;2.09e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.93e-24,15;CL:0002617,3.81e-21,2;CL:0002580,1.22e-14,3;CL:0002521,1.60e-14,3;CL:0002615,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!1.03e-26!3;UBERON:0004457!4.35e-18!12;UBERON:0000042!4.35e-18!12;UBERON:0000310!1.89e-14!10;UBERON:0003688!9.91e-14!6;UBERON:0002358!9.91e-14!6;UBERON:0003684!9.91e-14!6;UBERON:0001178!9.91e-14!6;UBERON:0001443!3.72e-13!11;UBERON:0006915!1.33e-12!3;UBERON:0002018!1.33e-12!3;UBERON:0002217!1.33e-12!3;UBERON:0007616!1.33e-12!3;UBERON:0002146!8.24e-10!1;UBERON:0005623!8.24e-10!1;UBERON:0004913!9.82e-10!1;UBERON:0003703!9.82e-10!1;UBERON:0001174!9.82e-10!1;UBERON:0004914!9.82e-10!1;UBERON:0004905!6.54e-08!5;UBERON:0000982!6.54e-08!5;UBERON:0004770!6.54e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;6.39e-17;10!UBERON:0001443;1.74e-15;11!UBERON:0002190;1.60e-14;3!UBERON:0002072;2.97e-09;5!UBERON:0003688;7.25e-08;6!UBERON:0002358;7.25e-08;6!UBERON:0003684;7.25e-08;6!UBERON:0001178;7.25e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,5.90e-17,10;UBERON:0001443,1.62e-15,11;UBERON:0002190,1.60e-14,3;UBERON:0002072,2.97e-09,5;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6 | |||
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|short_description=p@chr4:815301..815303,- | |short_description=p@chr4:815301..815303,- | ||
}} | }} |
Latest revision as of 07:18, 30 July 2015
Short description: | p@chr4:815301..815303, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:815301..815303, - |
Coexpression cluster: | C423_Preadipocyte_Adipocyte_Chondrocyte_tenocyte_Osteoblast_Synoviocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.93e-24 | 15 |
adipocyte of breast | 3.81e-21 | 2 |
preadipocyte of the breast | 1.22e-14 | 3 |
subcutaneous fat cell | 1.60e-14 | 3 |
adipocyte of omentum tissue | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 5.90e-17 | 10 |
chest | 1.62e-15 | 11 |
subcutaneous adipose tissue | 1.60e-14 | 3 |
hypodermis | 2.97e-09 | 5 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |