FFCP PHASE1:Hg19::chr1:203317142..203317164,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2331 | |EntrezGene=2331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3774 | |HGNC=3774 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=240bp_to_uc010pqi.1_5end | |association_with_transcript=240bp_to_uc010pqi.1_5end | ||
|cluster_id=chr1:203317142..203317164,- | |||
|coexpression_cluster_id=C546 | |||
|description=CAGE_peak_9_at_FMOD_5end | |description=CAGE_peak_9_at_FMOD_5end | ||
|id=chr1:203317142..203317164,- | |id=chr1:203317142..203317164,- | ||
|ontology_enrichment_celltype=CL:0000136!1.49e-11!15;CL:0000153!2.17e-08!9;CL:0000447!2.17e-08!9;CL:0000667!6.63e-07!6;CL:0000058!6.63e-07!6;CL:0000138!6.63e-07!6 | |ontology_enrichment_celltype=CL:0000136!1.49e-11!15;CL:0000153!2.17e-08!9;CL:0000447!2.17e-08!9;CL:0000667!6.63e-07!6;CL:0000058!6.63e-07!6;CL:0000138!6.63e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.34e-27;13!CL:0000153;1.18e-14;9!CL:0000447;1.18e-14;9!CL:0002615;1.83e-12;3!CL:0002579;1.10e-11;3!CL:0000138;2.20e-10;6!CL:0000327;1.68e-08;15!CL:0002617;3.47e-08;2!CL:0002334;2.64e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.72e-23,15;CL:0000153,1.29e-14,9;CL:0000447,1.29e-14,9;CL:0002615,2.26e-12,3;CL:0002579,8.88e-12,3;CL:0000058,2.43e-10,6;CL:0000138,2.43e-10,6;CL:0000327,1.77e-08,15;CL:0002617,3.01e-08,2;CL:0002334,2.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.83e-09;4!UBERON:0007284;9.83e-09;4!UBERON:0006965;5.24e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.85e-17!115;UBERON:0004457!1.25e-11!12;UBERON:0000042!1.25e-11!12;UBERON:0003688!3.00e-10!6;UBERON:0002358!3.00e-10!6;UBERON:0003684!3.00e-10!6;UBERON:0001178!3.00e-10!6 | |ontology_enrichment_uberon=UBERON:0007023!5.85e-17!115;UBERON:0004457!1.25e-11!12;UBERON:0000042!1.25e-11!12;UBERON:0003688!3.00e-10!6;UBERON:0002358!3.00e-10!6;UBERON:0003684!3.00e-10!6;UBERON:0001178!3.00e-10!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.00e-26;9!UBERON:0000042;9.00e-26;9!UBERON:0003688;2.14e-22;6!UBERON:0002358;2.14e-22;6!UBERON:0003684;2.14e-22;6!UBERON:0001178;2.14e-22;6!UBERON:0003978;1.67e-11;3!UBERON:0000946;1.67e-11;3!UBERON:0002133;1.70e-08;2!UBERON:0002081;2.59e-08;2!UBERON:0004458;4.35e-08;48!UBERON:0005406;5.24e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.12e-22,6;UBERON:0002358,2.12e-22,6;UBERON:0003684,2.12e-22,6;UBERON:0001178,2.12e-22,6;UBERON:0004457,5.60e-19,12;UBERON:0000042,5.60e-19,12;UBERON:0003978,2.35e-11,3;UBERON:0009751,2.35e-11,3;UBERON:0000946,2.35e-11,3;UBERON:0002523,2.35e-11,3;UBERON:0005983,2.35e-11,3;UBERON:0002165,2.35e-11,3;UBERON:0002062,2.35e-11,3;UBERON:0007280,2.35e-11,3;UBERON:0004458,8.90e-10,49;UBERON:0002133,1.74e-08,2;UBERON:0002081,3.23e-08,2;UBERON:0010227,3.23e-08,2;UBERON:0004797,3.64e-08,7;UBERON:0005406,3.87e-08,2;UBERON:0002323,2.14e-07,46;UBERON:0003886,2.96e-07,54 | |||
|phase1_expression=3.45188920614058,1.49870366723688,7.04772020479856,3.00219895059391,6.70441641640932,2.61701557230111,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,3.00802746381534,1.30361867064741,8.74814541756209,15.0856809793817,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,1.43723628363248,0,0,0,0,0.30648779579902,1.05166641234618,0,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0,0,0,1.61646056818812,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,2.29723871668228,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0.601892199455438,6.82222512167955,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,2.23297027036899,0,0.841980283299221,3.45975702990393,3.07024349440022,1.60853921143608,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,2.46426864140871,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,3.37772216476263,2.30506425071931,0,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0,0,0,0,2.39097585901284,0,0,0,0,1.24415835064723,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,1.15425387755696,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,2.41981432097328,0,2.02197054811161,0,0,0,0,0,0,0,0,0,0,0,4.01871336956669,0,0,0,0,0.193978032976839,0,1.35588444468319,0,0,0,0,0,3.84215390530835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6306712165393,1.14580212005842,2.15361907373044,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,2.1440859791201,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.640724475406168,0,0.828478110694391,1.48849806543585,0,0,0,2.1760712134779,3.7603484103405,7.35229384232308,4.91808946064707,0,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0.450772826991655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.596748666348824,1.65462722368366,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0.682986574053893,0.266107110487916,0,0,0,0,0,0,0.78493092850514,0,0,0,0,0,0.357382720883282,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,1.12929087541872,1.1598144313382,0.971421986118279,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0,0.375935671919414,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,2.1161073620616,0.371995018166751,0,0,0,0,7.60191006068622,0,0,0,0,1.89446745545599,0,0,0,1.70587185520785,0.476128862927481,0,0.0620747142958579,0,1.20929600728513,0.808468755832877,0.217716747896961,0,0.0673520530145875,0.932388670104793,1.99596213927608,0,0,0,0,2.34640942403454,0.366724332548599,1.22068853494722,0,1.00636896795513,0 | |phase1_expression=3.45188920614058,1.49870366723688,7.04772020479856,3.00219895059391,6.70441641640932,2.61701557230111,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,3.00802746381534,1.30361867064741,8.74814541756209,15.0856809793817,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,1.43723628363248,0,0,0,0,0.30648779579902,1.05166641234618,0,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0,0,0,1.61646056818812,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,2.29723871668228,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0.601892199455438,6.82222512167955,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,2.23297027036899,0,0.841980283299221,3.45975702990393,3.07024349440022,1.60853921143608,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,2.46426864140871,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,3.37772216476263,2.30506425071931,0,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0,0,0,0,2.39097585901284,0,0,0,0,1.24415835064723,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,1.15425387755696,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,2.41981432097328,0,2.02197054811161,0,0,0,0,0,0,0,0,0,0,0,4.01871336956669,0,0,0,0,0.193978032976839,0,1.35588444468319,0,0,0,0,0,3.84215390530835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6306712165393,1.14580212005842,2.15361907373044,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,2.1440859791201,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.640724475406168,0,0.828478110694391,1.48849806543585,0,0,0,2.1760712134779,3.7603484103405,7.35229384232308,4.91808946064707,0,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0.450772826991655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.596748666348824,1.65462722368366,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0.682986574053893,0.266107110487916,0,0,0,0,0,0,0.78493092850514,0,0,0,0,0,0.357382720883282,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,1.12929087541872,1.1598144313382,0.971421986118279,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0,0.375935671919414,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,2.1161073620616,0.371995018166751,0,0,0,0,7.60191006068622,0,0,0,0,1.89446745545599,0,0,0,1.70587185520785,0.476128862927481,0,0.0620747142958579,0,1.20929600728513,0.808468755832877,0.217716747896961,0,0.0673520530145875,0.932388670104793,1.99596213927608,0,0,0,0,2.34640942403454,0.366724332548599,1.22068853494722,0,1.00636896795513,0 | ||
|short_description=p9@FMOD | |short_description=p9@FMOD | ||
}} | }} |
Latest revision as of 23:03, 19 September 2015
Short description: | p9@FMOD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FMOD_5end |
Coexpression cluster: | C546_Chondrocyte_heart_mature_Adipocyte_teratocarcinoma_aorta_dura |
Association with transcript: | 240bp_to_uc010pqi.1_5end |
EntrezGene: | FMOD |
HGNC: | 3774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.72e-23 | 15 |
GAG secreting cell | 1.29e-14 | 9 |
carbohydrate secreting cell | 1.29e-14 | 9 |
adipocyte of omentum tissue | 2.26e-12 | 3 |
omentum preadipocyte | 8.88e-12 | 3 |
chondroblast | 2.43e-10 | 6 |
chondrocyte | 2.43e-10 | 6 |
extracellular matrix secreting cell | 1.77e-08 | 15 |
adipocyte of breast | 3.01e-08 | 2 |
preadipocyte | 2.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.12e-22 | 6 |
peritoneum | 2.12e-22 | 6 |
abdominal cavity | 2.12e-22 | 6 |
visceral peritoneum | 2.12e-22 | 6 |
cavity lining | 5.60e-19 | 12 |
serous membrane | 5.60e-19 | 12 |
valve | 2.35e-11 | 3 |
cardiac mesenchyme | 2.35e-11 | 3 |
cardial valve | 2.35e-11 | 3 |
tunica intima | 2.35e-11 | 3 |
heart layer | 2.35e-11 | 3 |
endocardium | 2.35e-11 | 3 |
endocardial cushion | 2.35e-11 | 3 |
presumptive endocardium | 2.35e-11 | 3 |
body cavity or lining | 8.90e-10 | 49 |
atrioventricular valve | 1.74e-08 | 2 |
cardiac atrium | 3.23e-08 | 2 |
future cardiac atrium | 3.23e-08 | 2 |
blood vessel layer | 3.64e-08 | 7 |
perirenal fat | 3.87e-08 | 2 |
body cavity | 2.14e-07 | 46 |
body cavity precursor | 2.96e-07 | 54 |