FFCP PHASE1:Hg19::chr1:203156457..203156458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:203156457..203156458,+ | |||
|description=CAGE_peak_at_chr1:203156457..203156458,+ | |description=CAGE_peak_at_chr1:203156457..203156458,+ | ||
|id=chr1:203156457..203156458,+ | |id=chr1:203156457..203156458,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;6.76e-18;3!CL:0000135;9.45e-18;3!CL:0000388;9.45e-18;3!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.76e-18,3;CL:0000135,1.12e-17,3;CL:0000388,1.12e-17,3;CL:0002202,7.48e-07,9;CL:0002632,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.99e-50;1!UBERON:0003056;9.45e-18;3!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;4.32e-26;2!DOID:3908;2.66e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.32e-26,2;DOID:3908,2.66e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0002780!3.15e-14!41;UBERON:0001890!3.15e-14!41;UBERON:0006240!3.15e-14!41;UBERON:0003080!8.53e-14!42;UBERON:0001049!2.05e-13!57;UBERON:0005068!2.05e-13!57;UBERON:0006241!2.05e-13!57;UBERON:0007135!2.05e-13!57;UBERON:0007023!5.97e-13!115;UBERON:0002616!8.56e-13!59;UBERON:0000955!2.21e-12!69;UBERON:0006238!2.21e-12!69;UBERON:0001893!1.24e-11!34;UBERON:0002346!8.51e-11!90;UBERON:0001017!1.00e-10!82;UBERON:0001869!1.31e-10!32;UBERON:0002791!2.26e-10!33;UBERON:0002020!5.46e-10!34;UBERON:0003528!5.46e-10!34;UBERON:0005743!5.60e-10!86;UBERON:0002619!1.34e-09!22;UBERON:0000073!1.38e-09!94;UBERON:0001016!1.38e-09!94;UBERON:0003075!2.51e-09!86;UBERON:0007284!2.51e-09!86;UBERON:0001950!1.71e-08!20;UBERON:0003056!2.76e-08!61;UBERON:0000956!2.97e-08!25;UBERON:0000203!2.97e-08!25;UBERON:0000200!5.01e-07!6 | |ontology_enrichment_uberon=UBERON:0002780!3.15e-14!41;UBERON:0001890!3.15e-14!41;UBERON:0006240!3.15e-14!41;UBERON:0003080!8.53e-14!42;UBERON:0001049!2.05e-13!57;UBERON:0005068!2.05e-13!57;UBERON:0006241!2.05e-13!57;UBERON:0007135!2.05e-13!57;UBERON:0007023!5.97e-13!115;UBERON:0002616!8.56e-13!59;UBERON:0000955!2.21e-12!69;UBERON:0006238!2.21e-12!69;UBERON:0001893!1.24e-11!34;UBERON:0002346!8.51e-11!90;UBERON:0001017!1.00e-10!82;UBERON:0001869!1.31e-10!32;UBERON:0002791!2.26e-10!33;UBERON:0002020!5.46e-10!34;UBERON:0003528!5.46e-10!34;UBERON:0005743!5.60e-10!86;UBERON:0002619!1.34e-09!22;UBERON:0000073!1.38e-09!94;UBERON:0001016!1.38e-09!94;UBERON:0003075!2.51e-09!86;UBERON:0007284!2.51e-09!86;UBERON:0001950!1.71e-08!20;UBERON:0003056!2.76e-08!61;UBERON:0000956!2.97e-08!25;UBERON:0000203!2.97e-08!25;UBERON:0000200!5.01e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.99e-50;1!UBERON:0000941;3.99e-50;1!UBERON:0001785;3.99e-50;1!UBERON:0002464;3.99e-50;1!UBERON:0004904;3.99e-50;1!UBERON:0001021;3.99e-50;1!UBERON:0005208;3.99e-50;1!UBERON:0004145;3.99e-50;1!UBERON:0005946;3.99e-50;1!UBERON:0005965;3.99e-50;1!UBERON:0002078;3.99e-50;1!UBERON:0004903;4.32e-26;2!UBERON:0002173;4.32e-26;2!UBERON:0002186;4.32e-26;2!UBERON:0003714;7.14e-26;2!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0002081;7.14e-26;2!UBERON:0002133;7.14e-26;2!UBERON:0004821;6.76e-18;3!UBERON:0007499;6.76e-18;3!UBERON:0003215;6.76e-18;3!UBERON:0010368;6.76e-18;3!UBERON:0009911;6.76e-18;3!UBERON:0002299;6.76e-18;3!UBERON:0006524;6.76e-18;3!UBERON:0008874;6.76e-18;3!UBERON:0002169;6.76e-18;3!UBERON:0004894;6.76e-18;3!UBERON:0007846;9.45e-18;3!UBERON:0003978;9.45e-18;3!UBERON:0004151;9.45e-18;3!UBERON:0000946;9.45e-18;3!UBERON:0000043;9.45e-18;3!UBERON:0007845;9.45e-18;3!UBERON:0009856;8.81e-14;4!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.42e-50,1;UBERON:0005208,2.42e-50,1;UBERON:0005946,2.42e-50,1;UBERON:0005965,2.42e-50,1;UBERON:0002078,2.42e-50,1;UBERON:0000941,3.99e-50,1;UBERON:0001785,3.99e-50,1;UBERON:0002464,3.99e-50,1;UBERON:0004904,3.99e-50,1;UBERON:0001021,3.99e-50,1;UBERON:0003902,3.99e-50,1;UBERON:0005425,3.99e-50,1;UBERON:0004903,4.32e-26,2;UBERON:0002173,4.32e-26,2;UBERON:0002186,4.32e-26,2;UBERON:0002081,5.56e-26,2;UBERON:0002133,5.56e-26,2;UBERON:0010227,5.56e-26,2;UBERON:0003714,7.14e-26,2;UBERON:0005162,7.14e-26,2;UBERON:0000122,7.14e-26,2;UBERON:0004821,6.76e-18,3;UBERON:0003215,6.76e-18,3;UBERON:0010368,6.76e-18,3;UBERON:0009911,6.76e-18,3;UBERON:0002299,6.76e-18,3;UBERON:0006524,6.76e-18,3;UBERON:0008874,6.76e-18,3;UBERON:0002169,6.76e-18,3;UBERON:0004894,6.76e-18,3;UBERON:0003978,8.00e-18,3;UBERON:0009751,8.00e-18,3;UBERON:0004151,8.00e-18,3;UBERON:0000946,8.00e-18,3;UBERON:0002523,8.00e-18,3;UBERON:0005983,8.00e-18,3;UBERON:0004145,8.00e-18,3;UBERON:0002165,8.00e-18,3;UBERON:0002062,8.00e-18,3;UBERON:0007280,8.00e-18,3;UBERON:0007846,1.12e-17,3;UBERON:0000043,1.12e-17,3;UBERON:0007845,1.12e-17,3;UBERON:0001781,1.13e-13,4;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0004797,2.03e-08,7;UBERON:0000010,8.37e-07,8 | |||
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| ||
|short_description=p@chr1:203156457..203156458,+ | |short_description=p@chr1:203156457..203156458,+ | ||
}} | }} |
Latest revision as of 02:25, 28 July 2015
Short description: | p@chr1:203156457..203156458, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203156457..203156458, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.76e-18 | 3 |
fibrocyte | 1.12e-17 | 3 |
tendon cell | 1.12e-17 | 3 |
epithelial cell of tracheobronchial tree | 7.48e-07 | 9 |
epithelial cell of lower respiratory tract | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.32e-26 | 2 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |