FFCP PHASE1:Hg19::chr4:74702338..74702349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6372 | |EntrezGene=6372 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10643 | |HGNC=10643 | ||
|TSSclassifier=strong | |||
|UniProt=D6RF92 | |UniProt=D6RF92 | ||
|association_with_transcript=-7bp_to_ENST00000515050_5end | |association_with_transcript=-7bp_to_ENST00000515050_5end | ||
|cluster_id=chr4:74702338..74702349,+ | |||
|coexpression_cluster_id=C1524 | |||
|description=CAGE_peak_2_at_CXCL6_5end | |description=CAGE_peak_2_at_CXCL6_5end | ||
|id=chr4:74702338..74702349,+ | |id=chr4:74702338..74702349,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.00e-33!180;CL:0000680!6.31e-32!57;CL:0000056!6.31e-32!57;CL:0000355!6.31e-32!57;CL:0000187!3.33e-30!54;CL:0000183!1.35e-29!59;CL:0000393!1.35e-29!60;CL:0000211!1.35e-29!60;CL:0000359!1.53e-25!32;CL:0000192!2.58e-25!42;CL:0000514!2.58e-25!42;CL:0000222!5.16e-21!119;CL:0002321!3.39e-16!248;CL:0000220!3.49e-16!246;CL:0002371!4.45e-13!591;CL:0002494!2.26e-12!16;CL:0000144!1.15e-11!625;CL:0002539!1.39e-09!10;CL:0000548!1.05e-08!679;CL:0000004!1.05e-08!679;CL:0000255!1.05e-08!679;CL:0000012!2.40e-08!682;CL:0000057!1.26e-07!75;CL:0000048!7.57e-07!430 | |ontology_enrichment_celltype=CL:0000055!8.00e-33!180;CL:0000680!6.31e-32!57;CL:0000056!6.31e-32!57;CL:0000355!6.31e-32!57;CL:0000187!3.33e-30!54;CL:0000183!1.35e-29!59;CL:0000393!1.35e-29!60;CL:0000211!1.35e-29!60;CL:0000359!1.53e-25!32;CL:0000192!2.58e-25!42;CL:0000514!2.58e-25!42;CL:0000222!5.16e-21!119;CL:0002321!3.39e-16!248;CL:0000220!3.49e-16!246;CL:0002371!4.45e-13!591;CL:0002494!2.26e-12!16;CL:0000144!1.15e-11!625;CL:0002539!1.39e-09!10;CL:0000548!1.05e-08!679;CL:0000004!1.05e-08!679;CL:0000255!1.05e-08!679;CL:0000012!2.40e-08!682;CL:0000057!1.26e-07!75;CL:0000048!7.57e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.05e-33;32!CL:0000192;1.19e-19;43!CL:0000187;3.34e-18;55!CL:0002494;4.72e-17;16!CL:0000393;1.64e-16;61!CL:0000211;1.64e-16;61!CL:0002539;3.01e-14;10!CL:0002595;1.99e-08;5!CL:0002548;5.13e-08;6!CL:0000153;1.77e-07;9!CL:0000447;1.77e-07;9!CL:0000327;1.90e-07;15!CL:0000723;9.45e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.45e-36,58;CL:0000056,6.45e-36,58;CL:0000355,6.45e-36,58;CL:0000359,2.27e-35,32;CL:0000187,2.62e-33,55;CL:0000393,1.51e-31,61;CL:0000211,1.51e-31,61;CL:0000192,1.91e-26,43;CL:0000514,1.91e-26,43;CL:0000222,2.38e-23,121;CL:0002494,5.68e-17,16;CL:0002321,8.65e-15,250;CL:0002539,3.28e-14,10;CL:0000048,8.71e-13,427;CL:0000723,3.46e-12,433;CL:0000034,2.02e-11,441;CL:0002595,2.02e-08,5;CL:0002548,5.15e-08,6;CL:0000153,1.81e-07,9;CL:0000447,1.81e-07,9;CL:0000327,2.02e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.19e-19;43!CL:0000355;3.16e-19;58 | |||
|ontology_enrichment_disease=DOID:2394!7.33e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.29e-15;14!DOID:193;4.90e-08;29!DOID:120;6.60e-08;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.77e-15,14;DOID:193,4.63e-08,29;DOID:120,6.66e-08,27 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.16e-28!61;UBERON:0002036!3.16e-28!61;UBERON:0003082!3.16e-28!61;UBERON:0002385!9.41e-28!63;UBERON:0001015!9.41e-28!63;UBERON:0000383!9.41e-28!63;UBERON:0000486!1.26e-27!82;UBERON:0000914!2.16e-27!83;UBERON:0002329!2.16e-27!83;UBERON:0003077!2.16e-27!83;UBERON:0003059!2.16e-27!83;UBERON:0007282!2.16e-27!83;UBERON:0009618!2.16e-27!83;UBERON:0007285!2.16e-27!83;UBERON:0004290!3.60e-27!70;UBERON:0004872!1.85e-23!84;UBERON:0005256!2.58e-23!143;UBERON:0002049!3.82e-21!79;UBERON:0007798!3.82e-21!79;UBERON:0004535!6.60e-21!110;UBERON:0001009!1.33e-19!113;UBERON:0001637!8.35e-19!42;UBERON:0003509!8.35e-19!42;UBERON:0004572!8.35e-19!42;UBERON:0003914!1.02e-17!118;UBERON:0000490!2.81e-17!138;UBERON:0001981!7.25e-17!60;UBERON:0007500!7.25e-17!60;UBERON:0004537!7.25e-17!60;UBERON:0006965!7.25e-17!60;UBERON:0000481!5.65e-16!347;UBERON:0000055!7.61e-16!69;UBERON:0004573!2.66e-14!33;UBERON:0004571!2.66e-14!33;UBERON:0000119!3.90e-14!312;UBERON:0000483!7.34e-14!309;UBERON:0002100!6.33e-13!216;UBERON:0003104!1.06e-12!238;UBERON:0009142!1.06e-12!238;UBERON:0000475!1.22e-12!365;UBERON:0000477!1.30e-12!286;UBERON:0004111!1.14e-10!241;UBERON:0004237!1.39e-09!10;UBERON:0004695!1.39e-09!10;UBERON:0002111!1.39e-09!10;UBERON:0004178!1.39e-09!10;UBERON:0001135!1.86e-09!15;UBERON:0000948!3.52e-09!24;UBERON:0005498!3.52e-09!24;UBERON:0004140!3.52e-09!24;UBERON:0009881!3.52e-09!24;UBERON:0004141!3.52e-09!24;UBERON:0003084!3.52e-09!24;UBERON:0007005!3.52e-09!24;UBERON:0004139!3.52e-09!24;UBERON:0004291!3.52e-09!24;UBERON:0007100!2.27e-07!27;UBERON:0000926!6.52e-07!448;UBERON:0004120!6.52e-07!448;UBERON:0006603!6.52e-07!448;UBERON:0000025!8.51e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.42e-20;33!UBERON:0004571;6.42e-20;33!UBERON:0001637;4.05e-18;42!UBERON:0003509;4.05e-18;42!UBERON:0004572;4.05e-18;42!UBERON:0004237;3.01e-14;10!UBERON:0004695;3.01e-14;10!UBERON:0002111;3.01e-14;10!UBERON:0004178;3.01e-14;10!UBERON:0002385;5.30e-13;31!UBERON:0001015;5.30e-13;31!UBERON:0000383;5.30e-13;31!UBERON:0002049;2.10e-11;75!UBERON:0007798;2.10e-11;75!UBERON:0000948;4.10e-11;22!UBERON:0007500;6.31e-11;56!UBERON:0001981;6.31e-11;56!UBERON:0004537;6.31e-11;56!UBERON:0001135;5.37e-10;15!UBERON:0007100;3.02e-09;25!UBERON:0003914;3.62e-09;74!UBERON:0000947;7.16e-09;21!UBERON:0010191;7.16e-09;21!UBERON:0000055;1.35e-08;65!UBERON:0003834;1.99e-08;5!UBERON:0001533;1.99e-08;5!UBERON:0000992;4.16e-08;13!UBERON:0002118;8.39e-08;5!UBERON:0003513;1.56e-07;7!UBERON:0004535;6.38e-07;109 | |||
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| ||
|short_description=p2@CXCL6 | |short_description=p2@CXCL6 | ||
}} | }} |
Latest revision as of 14:38, 18 September 2015
Short description: | p2@CXCL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CXCL6_5end |
Coexpression cluster: | C1524_Smooth_mesenchymal_Chondrocyte_Aortic_Synoviocyte_Preadipocyte_tenocyte |
Association with transcript: | -7bp_to_ENST00000515050_5end |
EntrezGene: | CXCL6 |
HGNC: | 10643 |
UniProt: | D6RF92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.45e-36 | 58 |
myoblast | 6.45e-36 | 58 |
multi-potent skeletal muscle stem cell | 6.45e-36 | 58 |
vascular associated smooth muscle cell | 2.27e-35 | 32 |
muscle cell | 2.62e-33 | 55 |
electrically responsive cell | 1.51e-31 | 61 |
electrically active cell | 1.51e-31 | 61 |
smooth muscle cell | 1.91e-26 | 43 |
smooth muscle myoblast | 1.91e-26 | 43 |
mesodermal cell | 2.38e-23 | 121 |
cardiocyte | 5.68e-17 | 16 |
embryonic cell | 8.65e-15 | 250 |
aortic smooth muscle cell | 3.28e-14 | 10 |
multi fate stem cell | 8.71e-13 | 427 |
somatic stem cell | 3.46e-12 | 433 |
stem cell | 2.02e-11 | 441 |
smooth muscle cell of the subclavian artery | 2.02e-08 | 5 |
cardiac fibroblast | 5.15e-08 | 6 |
GAG secreting cell | 1.81e-07 | 9 |
carbohydrate secreting cell | 1.81e-07 | 9 |
extracellular matrix secreting cell | 2.02e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.77e-15 | 14 |
reproductive organ cancer | 4.63e-08 | 29 |
female reproductive organ cancer | 6.66e-08 | 27 |