FFCP PHASE1:Hg19::chr1:201333446..201333456,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-130bp_to_ENST00000460780,uc001gwj.1_5end | |association_with_transcript=-130bp_to_ENST00000460780,uc001gwj.1_5end | ||
|cluster_id=chr1:201333446..201333456,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_18_at_TNNT2_5end | |description=CAGE_peak_18_at_TNNT2_5end | ||
|id=chr1:201333446..201333456,- | |id=chr1:201333446..201333456,- | ||
|ontology_enrichment_celltype=CL:0000188!4.16e-17!9;CL:0000515!3.28e-07!4 | |ontology_enrichment_celltype=CL:0000188!4.16e-17!9;CL:0000515!3.28e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.66e-45;4!UBERON:0007284;5.66e-45;4!UBERON:0010227;2.30e-21;1!UBERON:0010226;3.12e-21;1!UBERON:0004140;7.72e-21;1!UBERON:0006603;8.84e-07;65 | |||
|ontology_enrichment_disease=DOID:114!2.22e-14!2;DOID:178!5.58e-08!1;DOID:326!5.58e-08!1;DOID:3978!5.58e-08!1;DOID:3394!5.58e-08!1;DOID:5844!5.58e-08!1;DOID:1287!1.31e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;6.63e-41;2!DOID:178;3.12e-21;1!DOID:326;3.12e-21;1!DOID:3978;3.12e-21;1!DOID:3394;3.12e-21;1!DOID:5844;3.12e-21;1!DOID:1287;4.92e-21;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.33e-41,2;DOID:178,3.45e-21,1;DOID:326,3.45e-21,1;DOID:3978,3.45e-21,1;DOID:3394,3.45e-21,1;DOID:5844,3.45e-21,1;DOID:1287,5.17e-21,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.78e-22!27;UBERON:0004151!1.88e-20!3;UBERON:0003978!2.00e-20!3;UBERON:0009751!2.00e-20!3;UBERON:0000946!2.00e-20!3;UBERON:0002523!2.00e-20!3;UBERON:0005983!2.00e-20!3;UBERON:0002165!2.00e-20!3;UBERON:0002062!2.00e-20!3;UBERON:0007280!2.00e-20!3;UBERON:0003103!2.11e-15!69;UBERON:0002081!3.50e-14!2;UBERON:0002133!4.26e-14!2;UBERON:0000948!1.81e-12!24;UBERON:0005498!1.81e-12!24;UBERON:0004140!1.81e-12!24;UBERON:0009881!1.81e-12!24;UBERON:0004141!1.81e-12!24;UBERON:0003084!1.81e-12!24;UBERON:0007005!1.81e-12!24;UBERON:0004139!1.81e-12!24;UBERON:0004291!1.81e-12!24;UBERON:0002146!4.57e-08!1;UBERON:0005623!4.57e-08!1;UBERON:0002079!4.89e-08!1;UBERON:0002084!5.22e-08!1;UBERON:0002082!5.22e-08!1;UBERON:0004706!5.22e-08!1;UBERON:0002135!5.96e-08!1;UBERON:0002134!7.76e-08!1;UBERON:0005208!7.76e-08!1;UBERON:0005946!7.76e-08!1;UBERON:0005965!7.76e-08!1;UBERON:0002078!7.76e-08!1;UBERON:0005418!8.84e-08!1;UBERON:0001389!8.84e-08!1;UBERON:0000026!8.84e-08!1;UBERON:0008784!8.84e-08!1;UBERON:0006058!8.84e-08!1;UBERON:0003663!8.84e-08!1;UBERON:0001383!8.84e-08!1;UBERON:0004256!8.84e-08!1;UBERON:0002529!8.84e-08!1;UBERON:0004708!8.84e-08!1;UBERON:0002101!8.84e-08!1;UBERON:0004709!8.84e-08!1;UBERON:0003661!8.84e-08!1;UBERON:0002471!8.84e-08!1;UBERON:0004357!8.84e-08!1;UBERON:0009872!8.84e-08!1;UBERON:0004347!8.84e-08!1;UBERON:0005420!8.84e-08!1;UBERON:0005732!8.84e-08!1;UBERON:0006057!8.84e-08!1;UBERON:0000978!8.84e-08!1;UBERON:0002103!8.84e-08!1;UBERON:0001665!8.84e-08!1;UBERON:0003823!8.84e-08!1;UBERON:0000154!8.84e-08!1;UBERON:0005733!8.84e-08!1;UBERON:0005730!8.84e-08!1;UBERON:0007029!1.07e-07!1 | |ontology_enrichment_uberon=UBERON:0007100!1.78e-22!27;UBERON:0004151!1.88e-20!3;UBERON:0003978!2.00e-20!3;UBERON:0009751!2.00e-20!3;UBERON:0000946!2.00e-20!3;UBERON:0002523!2.00e-20!3;UBERON:0005983!2.00e-20!3;UBERON:0002165!2.00e-20!3;UBERON:0002062!2.00e-20!3;UBERON:0007280!2.00e-20!3;UBERON:0003103!2.11e-15!69;UBERON:0002081!3.50e-14!2;UBERON:0002133!4.26e-14!2;UBERON:0000948!1.81e-12!24;UBERON:0005498!1.81e-12!24;UBERON:0004140!1.81e-12!24;UBERON:0009881!1.81e-12!24;UBERON:0004141!1.81e-12!24;UBERON:0003084!1.81e-12!24;UBERON:0007005!1.81e-12!24;UBERON:0004139!1.81e-12!24;UBERON:0004291!1.81e-12!24;UBERON:0002146!4.57e-08!1;UBERON:0005623!4.57e-08!1;UBERON:0002079!4.89e-08!1;UBERON:0002084!5.22e-08!1;UBERON:0002082!5.22e-08!1;UBERON:0004706!5.22e-08!1;UBERON:0002135!5.96e-08!1;UBERON:0002134!7.76e-08!1;UBERON:0005208!7.76e-08!1;UBERON:0005946!7.76e-08!1;UBERON:0005965!7.76e-08!1;UBERON:0002078!7.76e-08!1;UBERON:0005418!8.84e-08!1;UBERON:0001389!8.84e-08!1;UBERON:0000026!8.84e-08!1;UBERON:0008784!8.84e-08!1;UBERON:0006058!8.84e-08!1;UBERON:0003663!8.84e-08!1;UBERON:0001383!8.84e-08!1;UBERON:0004256!8.84e-08!1;UBERON:0002529!8.84e-08!1;UBERON:0004708!8.84e-08!1;UBERON:0002101!8.84e-08!1;UBERON:0004709!8.84e-08!1;UBERON:0003661!8.84e-08!1;UBERON:0002471!8.84e-08!1;UBERON:0004357!8.84e-08!1;UBERON:0009872!8.84e-08!1;UBERON:0004347!8.84e-08!1;UBERON:0005420!8.84e-08!1;UBERON:0005732!8.84e-08!1;UBERON:0006057!8.84e-08!1;UBERON:0000978!8.84e-08!1;UBERON:0002103!8.84e-08!1;UBERON:0001665!8.84e-08!1;UBERON:0003823!8.84e-08!1;UBERON:0000154!8.84e-08!1;UBERON:0005733!8.84e-08!1;UBERON:0005730!8.84e-08!1;UBERON:0007029!1.07e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.85e-63;25!UBERON:0004151;1.10e-59;3!UBERON:0003978;1.22e-59;3!UBERON:0000946;1.22e-59;3!UBERON:0002081;2.46e-40;2!UBERON:0002133;4.49e-40;2!UBERON:0000948;2.97e-32;22!UBERON:0002146;1.88e-21;1!UBERON:0005623;1.88e-21;1!UBERON:0002079;2.30e-21;1!UBERON:0002084;3.12e-21;1!UBERON:0002082;3.12e-21;1!UBERON:0002135;4.22e-21;1!UBERON:0002134;7.72e-21;1!UBERON:0005208;7.72e-21;1!UBERON:0004145;7.72e-21;1!UBERON:0005946;7.72e-21;1!UBERON:0005965;7.72e-21;1!UBERON:0002078;7.72e-21;1!UBERON:0010313;1.73e-18;10!UBERON:0003103;6.86e-13;61!UBERON:0001009;3.14e-07;112 | |||
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|short_description=p18@TNNT2 | |short_description=p18@TNNT2 | ||
}} | }} |
Latest revision as of 17:26, 19 September 2015
Short description: | p18@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -130bp_to_ENST00000460780, uc001gwj.1_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 7.33e-41 | 2 |
vascular disease | 3.45e-21 | 1 |
ischemia | 3.45e-21 | 1 |
extrinsic cardiomyopathy | 3.45e-21 | 1 |
myocardial ischemia | 3.45e-21 | 1 |
myocardial infarction | 3.45e-21 | 1 |
cardiovascular system disease | 5.17e-21 | 4 |