FFCP PHASE1:Hg19::chr1:187230638..187230648,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:187230638..187230648,+ | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_at_chr1:187230638..187230648,+ | |description=CAGE_peak_at_chr1:187230638..187230648,+ | ||
|id=chr1:187230638..187230648,+ | |id=chr1:187230638..187230648,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002149;2.74e-12;6!CL:0002255;2.74e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.74e-12,6;CL:0002255,2.74e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3001;2.74e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.81e-31!57;UBERON:0005068!9.81e-31!57;UBERON:0006241!9.81e-31!57;UBERON:0007135!9.81e-31!57;UBERON:0002616!8.68e-26!59;UBERON:0002791!1.58e-25!33;UBERON:0001893!9.53e-25!34;UBERON:0002780!3.29e-24!41;UBERON:0001890!3.29e-24!41;UBERON:0006240!3.29e-24!41;UBERON:0003080!1.34e-23!42;UBERON:0001017!3.33e-23!82;UBERON:0005743!5.22e-22!86;UBERON:0000955!2.26e-21!69;UBERON:0006238!2.26e-21!69;UBERON:0002020!2.30e-20!34;UBERON:0003528!2.30e-20!34;UBERON:0000073!1.12e-19!94;UBERON:0001016!1.12e-19!94;UBERON:0003075!1.60e-19!86;UBERON:0007284!1.60e-19!86;UBERON:0002346!1.55e-18!90;UBERON:0000369!3.49e-18!4;UBERON:0002435!3.49e-18!4;UBERON:0000204!3.49e-18!4;UBERON:0010082!3.49e-18!4;UBERON:0007023!3.64e-18!115;UBERON:0009663!5.46e-18!7;UBERON:0001869!1.44e-17!32;UBERON:0003056!9.96e-16!61;UBERON:0002298!3.81e-15!8;UBERON:0002308!4.85e-14!9;UBERON:0002420!4.85e-14!9;UBERON:0000125!4.85e-14!9;UBERON:0007245!4.85e-14!9;UBERON:0010009!4.85e-14!9;UBERON:0010011!4.85e-14!9;UBERON:0000454!4.85e-14!9;UBERON:0001950!1.04e-12!20;UBERON:0002619!1.46e-11!22;UBERON:0005383!2.15e-11!3;UBERON:0005382!2.15e-11!3;UBERON:0000033!5.88e-11!123;UBERON:0001896!7.36e-11!3;UBERON:0005290!7.36e-11!3;UBERON:0010096!7.36e-11!3;UBERON:0000153!2.50e-10!129;UBERON:0007811!2.50e-10!129;UBERON:0000956!3.58e-10!25;UBERON:0000203!3.58e-10!25;UBERON:0004121!9.87e-10!169;UBERON:0000924!1.94e-09!173;UBERON:0006601!1.94e-09!173;UBERON:0002902!2.22e-09!1;UBERON:0009899!2.22e-09!1;UBERON:0002336!3.31e-09!1;UBERON:0001018!3.31e-09!1;UBERON:0002473!3.31e-09!1;UBERON:0005340!3.31e-09!1;UBERON:0002316!3.31e-09!1;UBERON:0003544!3.31e-09!1;UBERON:0001020!3.31e-09!1;UBERON:0005970!3.31e-09!1;UBERON:0002437!3.31e-09!1;UBERON:0001882!3.58e-09!1;UBERON:0005403!3.58e-09!1;UBERON:0002022!4.19e-09!1;UBERON:0001874!4.54e-09!1;UBERON:0002038!5.31e-09!1;UBERON:0009661!5.31e-09!1;UBERON:0003076!3.01e-08!15;UBERON:0003057!3.01e-08!15;UBERON:0000025!4.40e-07!194 | |ontology_enrichment_uberon=UBERON:0001049!9.81e-31!57;UBERON:0005068!9.81e-31!57;UBERON:0006241!9.81e-31!57;UBERON:0007135!9.81e-31!57;UBERON:0002616!8.68e-26!59;UBERON:0002791!1.58e-25!33;UBERON:0001893!9.53e-25!34;UBERON:0002780!3.29e-24!41;UBERON:0001890!3.29e-24!41;UBERON:0006240!3.29e-24!41;UBERON:0003080!1.34e-23!42;UBERON:0001017!3.33e-23!82;UBERON:0005743!5.22e-22!86;UBERON:0000955!2.26e-21!69;UBERON:0006238!2.26e-21!69;UBERON:0002020!2.30e-20!34;UBERON:0003528!2.30e-20!34;UBERON:0000073!1.12e-19!94;UBERON:0001016!1.12e-19!94;UBERON:0003075!1.60e-19!86;UBERON:0007284!1.60e-19!86;UBERON:0002346!1.55e-18!90;UBERON:0000369!3.49e-18!4;UBERON:0002435!3.49e-18!4;UBERON:0000204!3.49e-18!4;UBERON:0010082!3.49e-18!4;UBERON:0007023!3.64e-18!115;UBERON:0009663!5.46e-18!7;UBERON:0001869!1.44e-17!32;UBERON:0003056!9.96e-16!61;UBERON:0002298!3.81e-15!8;UBERON:0002308!4.85e-14!9;UBERON:0002420!4.85e-14!9;UBERON:0000125!4.85e-14!9;UBERON:0007245!4.85e-14!9;UBERON:0010009!4.85e-14!9;UBERON:0010011!4.85e-14!9;UBERON:0000454!4.85e-14!9;UBERON:0001950!1.04e-12!20;UBERON:0002619!1.46e-11!22;UBERON:0005383!2.15e-11!3;UBERON:0005382!2.15e-11!3;UBERON:0000033!5.88e-11!123;UBERON:0001896!7.36e-11!3;UBERON:0005290!7.36e-11!3;UBERON:0010096!7.36e-11!3;UBERON:0000153!2.50e-10!129;UBERON:0007811!2.50e-10!129;UBERON:0000956!3.58e-10!25;UBERON:0000203!3.58e-10!25;UBERON:0004121!9.87e-10!169;UBERON:0000924!1.94e-09!173;UBERON:0006601!1.94e-09!173;UBERON:0002902!2.22e-09!1;UBERON:0009899!2.22e-09!1;UBERON:0002336!3.31e-09!1;UBERON:0001018!3.31e-09!1;UBERON:0002473!3.31e-09!1;UBERON:0005340!3.31e-09!1;UBERON:0002316!3.31e-09!1;UBERON:0003544!3.31e-09!1;UBERON:0001020!3.31e-09!1;UBERON:0005970!3.31e-09!1;UBERON:0002437!3.31e-09!1;UBERON:0001882!3.58e-09!1;UBERON:0005403!3.58e-09!1;UBERON:0002022!4.19e-09!1;UBERON:0001874!4.54e-09!1;UBERON:0002038!5.31e-09!1;UBERON:0009661!5.31e-09!1;UBERON:0003076!3.01e-08!15;UBERON:0003057!3.01e-08!15;UBERON:0000025!4.40e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.40e-14;5!UBERON:0010039;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10939738410511,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,6.98673236612086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,2.5426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10939738410511,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,6.98673236612086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,2.5426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.345786262321089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:187230638..187230648,+ | |short_description=p@chr1:187230638..187230648,+ | ||
}} | }} |
Latest revision as of 01:34, 28 July 2015
Short description: | p@chr1:187230638..187230648, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:187230638..187230648, + |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.74e-12 | 6 |
stromal cell of endometrium | 2.74e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.74e-12 | 6 |