FFCP PHASE1:Hg19::chr12:56727487..56727533,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:56727487..56727533,-
|short_description=p3@PAN2
|description=CAGE_peak_3_at_PAN2_5end
|association_with_transcript=0bp_to_ENST00000425394,ENST00000548043,...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9924 | |EntrezGene=9924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20074 | |HGNC=20074 | ||
|TSSclassifier=strong | |||
|UniProt=Q504Q3 | |UniProt=Q504Q3 | ||
|association_with_transcript=0bp_to_ENST00000425394,ENST00000548043,NM_001127460,uc001skx.2_5end | |||
|cluster_id=chr12:56727487..56727533,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_PAN2_5end | |||
|id=chr12:56727487..56727533,- | |||
|ontology_enrichment_celltype=CL:0000945!2.40e-14!24;CL:0000826!2.40e-14!24;CL:0000542!5.38e-14!53;CL:0000051!5.38e-14!53;CL:0000838!1.07e-13!52;CL:0002087!2.19e-11!119;CL:0002031!5.32e-11!124;CL:0000738!1.01e-10!140;CL:0000236!8.49e-10!14;CL:0000988!5.98e-09!182;CL:0000037!7.55e-09!172;CL:0000566!7.55e-09!172;CL:0002032!3.57e-08!165;CL:0000837!3.57e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0002032;8.20e-11;1!CL:0002553;8.20e-11;1!CL:0000557;8.20e-11;1!CL:0000945;9.59e-10;24!CL:0000542;2.01e-07;53!CL:0000236;4.23e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,5.57e-11,1;CL:0000945,6.83e-10,24;CL:0000826,6.83e-10,24;CL:0000838,2.64e-08,52;CL:0000542,3.91e-08,53;CL:0000051,3.91e-08,53;CL:0000236,9.99e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.01e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;8.20e-11;1!DOID:0070004;8.20e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,7.46e-11,1;DOID:0070004,7.46e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.91e-10!57;UBERON:0005068!6.91e-10!57;UBERON:0006241!6.91e-10!57;UBERON:0007135!6.91e-10!57;UBERON:0002616!1.39e-07!59;UBERON:0002346!2.01e-07!90;UBERON:0002020!2.54e-07!34;UBERON:0003528!2.54e-07!34;UBERON:0000073!3.51e-07!94;UBERON:0001016!3.51e-07!94;UBERON:0001950!3.64e-07!20;UBERON:0001893!5.16e-07!34;UBERON:0002791!8.05e-07!33;UBERON:0002619!8.65e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.66e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.00e-08,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.534893840235659,0.656804715599566,0.314843125254717,0,0,0.154816123316076,0,0,0,1.62681121218633,0.853015394924529,0.587200878669695,0,0.601633342410425,0.434021741431704,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0.236482229888585,0.689491361473237,0,0,0,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0.889509253863555,0.853460445133014,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,1.17447437874188,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0,0,0.111410456885174,0,0,0.812411591295047,0.128091319725675,0.260118695119756,0,0,0.289803085735052,0.444859689486181,0.802622484269139,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,3.99486180268024,0,0,0,0.174129737299267,0,0.715471872916026,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0.185176890317059,0,1.03993478527958,0,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0.383382679165211,0,0.352193736052904,0.621984346622316,0.864719720501769,0.25248486685276,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0.206768026122887,0,0.533637789017222,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.515205058238611,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.711418433484141,0.478278818186467,0,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,1.11443384277478,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0,0,0.276283915531148,0,0,0.738508832766417,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.463840490809256,0,0,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,0.344743373241465,0,0,0,0.723578631752448,0,0.884634079449797,0,0,0.10893846351899,0,0,0.113942055847001,0.23056390438806,0,0.108647371922008,0,0,0,2.04386596391473,0,0,0,0.19606253431774,0.335643173951685,0.189753732724185,0.158936578980379,0,0.326465616318295,0.141353071433941,0.216388639742091,0,0,0.611030144933625,0.593042257361244,0.494255755786011,0,0.269604531922708,0,0,0.364909578431332,0.19566461893209,0,0.789168805698781,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.0882561266915003,0,0,0,0.189932387867636,0.195551382734803,0.0801588202515337,0,0,0,0.114536596165916,0.343189995723929,0,0.248505071130865,0,0,0.104602846312333,0.101998217636322,0,0,0.410716136675979,1.27746588066972,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0,0,0,0,0.303747783290123,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0.146552233678082,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.500763722825999,1.14681839138014,0.332787154610557,0.0620964029413835,0,0.124980407962107,0.151649117541648,0.856396000634902,0.470531639396343,0,0,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0.463044948647668,0,0,0,0,0,0,0.337884881306145,0,0,0,0.276516872303462,0.194860308839388,0.132864840313363,0,0,0,0,0.19998739585493,0,1.37771983728653,0,0.184105950251841,0,0.622077260032973,0.383683113910955,0,0.943595651135378,0.109209638192014,0,0.212574920101683,0.743614585554013,0,0,0.47317047000752,1.60114149657094,0,0,0.385375350578757,1.41696576325585,0.319267718114302,0.205116364240755,1.00828678488687,0.207471757392654,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0.135075169236789,0,0.620060389503552,0.443910671357348,0.546974809018219,0,0,0.527613733078862,0.638812138197976,0,0.672567444437648,0,0.91064876540519,0,0.345701962667338,0,0.135939465953663,0.328863867814245,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,1.38251932362818,0,0.709992004383392,1.19298766662821,0.423387050190929,0,0.31020638566432,0,0,0,0.243835849964539,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0.301925687133347,0,0,0,0.245148321753905,0,0.392616934229891,0.594092800654172,0,0,0.187967835959707,0.128915775947154,0.499705779624645,0.178553938605658,0,0.401206833445841,0,0,0.143339583151451,0.157771562193185,0.135982980381829,0.436350690340377,0,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0.18378979906969,0.250707539292375,6.06229585745915,14.4700630284336,0,0.103432995861895,0,0,0.710478008196067,0.620747142958579,0,0.318235791390825,0,0,0,0.336760265072938,0.143444410785353,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.534893840235659,0.656804715599566,0.314843125254717,0,0,0.154816123316076,0,0,0,1.62681121218633,0.853015394924529,0.587200878669695,0,0.601633342410425,0.434021741431704,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0.236482229888585,0.689491361473237,0,0,0,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0.889509253863555,0.853460445133014,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,1.17447437874188,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0,0,0.111410456885174,0,0,0.812411591295047,0.128091319725675,0.260118695119756,0,0,0.289803085735052,0.444859689486181,0.802622484269139,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,3.99486180268024,0,0,0,0.174129737299267,0,0.715471872916026,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0.185176890317059,0,1.03993478527958,0,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0.383382679165211,0,0.352193736052904,0.621984346622316,0.864719720501769,0.25248486685276,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0.206768026122887,0,0.533637789017222,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.515205058238611,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.711418433484141,0.478278818186467,0,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,1.11443384277478,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0,0,0.276283915531148,0,0,0.738508832766417,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.463840490809256,0,0,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,0.344743373241465,0,0,0,0.723578631752448,0,0.884634079449797,0,0,0.10893846351899,0,0,0.113942055847001,0.23056390438806,0,0.108647371922008,0,0,0,2.04386596391473,0,0,0,0.19606253431774,0.335643173951685,0.189753732724185,0.158936578980379,0,0.326465616318295,0.141353071433941,0.216388639742091,0,0,0.611030144933625,0.593042257361244,0.494255755786011,0,0.269604531922708,0,0,0.364909578431332,0.19566461893209,0,0.789168805698781,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.0882561266915003,0,0,0,0.189932387867636,0.195551382734803,0.0801588202515337,0,0,0,0.114536596165916,0.343189995723929,0,0.248505071130865,0,0,0.104602846312333,0.101998217636322,0,0,0.410716136675979,1.27746588066972,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0,0,0,0,0.303747783290123,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0.146552233678082,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.500763722825999,1.14681839138014,0.332787154610557,0.0620964029413835,0,0.124980407962107,0.151649117541648,0.856396000634902,0.470531639396343,0,0,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0.463044948647668,0,0,0,0,0,0,0.337884881306145,0,0,0,0.276516872303462,0.194860308839388,0.132864840313363,0,0,0,0,0.19998739585493,0,1.37771983728653,0,0.184105950251841,0,0.622077260032973,0.383683113910955,0,0.943595651135378,0.109209638192014,0,0.212574920101683,0.743614585554013,0,0,0.47317047000752,1.60114149657094,0,0,0.385375350578757,1.41696576325585,0.319267718114302,0.205116364240755,1.00828678488687,0.207471757392654,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0.135075169236789,0,0.620060389503552,0.443910671357348,0.546974809018219,0,0,0.527613733078862,0.638812138197976,0,0.672567444437648,0,0.91064876540519,0,0.345701962667338,0,0.135939465953663,0.328863867814245,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,1.38251932362818,0,0.709992004383392,1.19298766662821,0.423387050190929,0,0.31020638566432,0,0,0,0.243835849964539,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0.301925687133347,0,0,0,0.245148321753905,0,0.392616934229891,0.594092800654172,0,0,0.187967835959707,0.128915775947154,0.499705779624645,0.178553938605658,0,0.401206833445841,0,0,0.143339583151451,0.157771562193185,0.135982980381829,0.436350690340377,0,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0.18378979906969,0.250707539292375,6.06229585745915,14.4700630284336,0,0.103432995861895,0,0,0.710478008196067,0.620747142958579,0,0.318235791390825,0,0,0,0.336760265072938,0.143444410785353,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p3@PAN2 | |||
}} | }} |
Latest revision as of 10:47, 19 September 2015
Short description: | p3@PAN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAN2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000425394, ENST00000548043, NM_001127460, uc001skx.2_5end |
EntrezGene: | PAN2 |
HGNC: | 20074 |
UniProt: | Q504Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 5.57e-11 | 1 |
lymphocyte of B lineage | 6.83e-10 | 24 |
pro-B cell | 6.83e-10 | 24 |
lymphoid lineage restricted progenitor cell | 2.64e-08 | 52 |
lymphocyte | 3.91e-08 | 53 |
common lymphoid progenitor | 3.91e-08 | 53 |
B cell | 9.99e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.00e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 7.46e-11 | 1 |
myeloma | 7.46e-11 | 1 |