FFCP PHASE1:Hg19::chr1:183211988..183211991,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183211988..183211991,+ | |||
|coexpression_cluster_id=C268 | |||
|description=CAGE_peak_at_chr1:183211988..183211991,+ | |description=CAGE_peak_at_chr1:183211988..183211991,+ | ||
|id=chr1:183211988..183211991,+ | |id=chr1:183211988..183211991,+ | ||
|ontology_enrichment_celltype=CL:0002076!5.04e-26!43;CL:0000066!8.30e-22!254;CL:0002368!1.82e-18!13;CL:0000223!2.08e-17!59;CL:0000244!3.56e-13!4;CL:0000731!3.56e-13!4;CL:0002202!3.00e-12!9;CL:0002632!3.00e-12!9;CL:0002159!2.78e-11!13;CL:0002166!1.68e-10!3;CL:0002328!3.96e-10!3;CL:0002621!5.36e-10!3;CL:0002251!7.91e-10!21 | |ontology_enrichment_celltype=CL:0002076!5.04e-26!43;CL:0000066!8.30e-22!254;CL:0002368!1.82e-18!13;CL:0000223!2.08e-17!59;CL:0000244!3.56e-13!4;CL:0000731!3.56e-13!4;CL:0002202!3.00e-12!9;CL:0002632!3.00e-12!9;CL:0002159!2.78e-11!13;CL:0002166!1.68e-10!3;CL:0002328!3.96e-10!3;CL:0002621!5.36e-10!3;CL:0002251!7.91e-10!21 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.46e-25;13!CL:0002166;1.62e-18;3!CL:0002076;1.99e-18;42!CL:0002159;2.48e-15;14!CL:0002252;1.61e-14;1!CL:0000244;2.11e-14;4!CL:0000731;2.11e-14;4!CL:0002202;6.58e-14;9!CL:0002632;6.58e-14;9!CL:0000317;6.57e-08;2!CL:1000448;6.57e-08;2!CL:0002308;6.57e-08;2!CL:0002140;6.57e-08;2!CL:0000362;8.84e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.84e-25,13;CL:0002076,2.05e-19,42;CL:0002166,1.14e-18,3;CL:0002159,2.14e-15,14;CL:0002252,1.61e-14,1;CL:0000244,1.72e-14,4;CL:0000731,1.72e-14,4;CL:0000223,7.28e-14,58;CL:0002202,8.77e-14,9;CL:0002632,8.77e-14,9;CL:0000066,3.03e-10,253;CL:0000317,8.60e-08,2;CL:1000448,8.60e-08,2;CL:0002308,8.60e-08,2;CL:0002140,8.60e-08,2;CL:0000362,8.84e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.91e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;6.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000365!1.43e-15!5;UBERON:0005910!6.56e-13!6;UBERON:0005911!7.86e-12!82;UBERON:0004815!3.96e-10!3;UBERON:0002031!3.96e-10!3;UBERON:0001949!5.36e-10!3;UBERON:0004119!1.08e-09!169;UBERON:0000925!1.08e-09!169;UBERON:0006595!1.08e-09!169;UBERON:0005153!4.37e-09!37;UBERON:0006554!2.43e-08!44;UBERON:0005157!2.75e-08!51;UBERON:0001008!4.30e-08!45;UBERON:0001004!5.62e-08!72;UBERON:0001708!5.90e-08!4;UBERON:0001704!5.90e-08!4;UBERON:0000161!1.02e-07!35;UBERON:0002185!1.11e-07!4;UBERON:0007196!1.38e-07!14;UBERON:0001558!1.38e-07!14;UBERON:0004807!3.27e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.85e-14;4!UBERON:0008895;3.85e-14;4!UBERON:0000365;1.03e-11;5!UBERON:0011159;1.66e-11;5!UBERON:0000486;1.29e-10;12!UBERON:0005910;6.49e-10;6!UBERON:0007196;1.42e-08;15!UBERON:0001558;1.42e-08;15!UBERON:0002419;6.57e-08;2!UBERON:0004903;6.57e-08;2!UBERON:0007771;6.57e-08;2!UBERON:0003297;6.57e-08;2!UBERON:0001821;6.57e-08;2!UBERON:0003487;6.57e-08;2!UBERON:0001820;6.57e-08;2!UBERON:0002173;6.57e-08;2!UBERON:0002186;6.57e-08;2!UBERON:0005911;6.34e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,2.95e-14,4;UBERON:0008895,2.95e-14,4;UBERON:0000365,8.78e-12,5;UBERON:0011159,1.35e-11,5;UBERON:0005910,5.68e-10,6;UBERON:0010188,8.11e-10,6;UBERON:0002539,8.11e-10,6;UBERON:0008816,8.11e-10,6;UBERON:0007196,1.69e-08,15;UBERON:0001558,1.69e-08,15;UBERON:0002419,8.60e-08,2;UBERON:0007771,8.60e-08,2;UBERON:0003297,8.60e-08,2;UBERON:0001821,8.60e-08,2;UBERON:0003487,8.60e-08,2;UBERON:0001820,8.60e-08,2;UBERON:0005089,8.60e-08,2;UBERON:0005088,8.60e-08,2;UBERON:0004903,9.19e-08,2;UBERON:0002173,9.19e-08,2;UBERON:0002186,9.19e-08,2;UBERON:0004119,4.14e-07,160;UBERON:0000925,4.14e-07,160;UBERON:0006595,4.14e-07,160 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.658501712451753,0,1.70899253099772,0.462942225792648,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,1.84780341018745,1.27597587518148,1.43293636324557,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,2.40607764363942,0.184161977871793,0,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.495854746082934,1.53752053892085,3.44554323735377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50177493086331,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0.443430153536676,4.36474460393223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:183211988..183211991,+ | |short_description=p@chr1:183211988..183211991,+ | ||
}} | }} |
Latest revision as of 01:10, 28 July 2015
Short description: | p@chr1:183211988..183211991, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183211988..183211991, + |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.84e-25 | 13 |
endo-epithelial cell | 2.05e-19 | 42 |
epithelial cell of Malassez | 1.14e-18 | 3 |
general ecto-epithelial cell | 2.14e-15 | 14 |
epithelial cell of esophagus | 1.61e-14 | 1 |
transitional epithelial cell | 1.72e-14 | 4 |
urothelial cell | 1.72e-14 | 4 |
endodermal cell | 7.28e-14 | 58 |
epithelial cell of tracheobronchial tree | 8.77e-14 | 9 |
epithelial cell of lower respiratory tract | 8.77e-14 | 9 |
epithelial cell | 3.03e-10 | 253 |
sebum secreting cell | 8.60e-08 | 2 |
epithelial cell of sweat gland | 8.60e-08 | 2 |
epithelial cell of skin gland | 8.60e-08 | 2 |
acinar cell of sebaceous gland | 8.60e-08 | 2 |
epidermal cell | 8.84e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 2.95e-14 | 4 |
splanchnocranium | 2.95e-14 | 4 |
urothelium | 8.78e-12 | 5 |
primary subdivision of cranial skeletal system | 1.35e-11 | 5 |
transitional epithelium | 5.68e-10 | 6 |
protuberance | 8.11e-10 | 6 |
pharyngeal arch | 8.11e-10 | 6 |
embryonic head | 8.11e-10 | 6 |
tracheobronchial tree | 1.69e-08 | 15 |
lower respiratory tract | 1.69e-08 | 15 |
skin gland | 8.60e-08 | 2 |
epidermis gland | 8.60e-08 | 2 |
gland of integumental system | 8.60e-08 | 2 |
sebaceous gland | 8.60e-08 | 2 |
skin sebaceous gland | 8.60e-08 | 2 |
sweat gland | 8.60e-08 | 2 |
sweat gland placode | 8.60e-08 | 2 |
sebaceous gland placode | 8.60e-08 | 2 |
bronchoalveolar duct junction | 9.19e-08 | 2 |
alveolar duct | 9.19e-08 | 2 |
bronchiole | 9.19e-08 | 2 |
endoderm-derived structure | 4.14e-07 | 160 |
endoderm | 4.14e-07 | 160 |
presumptive endoderm | 4.14e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 9.19e-08 | 2 |