FFCP PHASE1:Hg19::chr12:56364867..56364892,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:56364867..56364892,+
|short_description=p7@CDK2
|description=CAGE_peak_7_at_CDK2_5end
|association_with_transcript=-11bp_to_ENST00000554545_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1017 | |EntrezGene=1017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1771 | |HGNC=1771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000554545_5end | |||
|cluster_id=chr12:56364867..56364892,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_7_at_CDK2_5end | |||
|id=chr12:56364867..56364892,+ | |||
|ontology_enrichment_celltype=CL:0000148!6.68e-12!10;CL:0000541!6.68e-12!10;CL:0000710!2.31e-10!20;CL:0000075!3.03e-10!27;CL:0002567!1.73e-08!3;CL:0000147!4.25e-08!14;CL:0000453!1.84e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000148;6.13e-88;10!CL:0000147;7.81e-63;14!CL:0002567;1.65e-54;3!CL:0000710;5.55e-44;20!CL:0000075;1.47e-32;27!CL:0002077;8.68e-23;34!CL:0002566;8.95e-20;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.74e-88,10;CL:0000541,4.74e-88,10;CL:0000147,6.50e-63,14;CL:0002567,1.25e-54,3;CL:0000710,4.88e-44,20;CL:0000075,1.34e-32,27;CL:0002077,7.34e-26,34;CL:0000333,2.08e-20,41;CL:0002566,8.95e-20,1;CL:0000133,2.59e-14,59;CL:0000221,9.61e-12,72 | |||
|ontology_enrichment_development_v019=CL:0000133;5.86e-08;59!UBERON:0003056;2.97e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.04e-36;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.52e-36,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.8262073066115,1.90994212779139,7.03304683260282,3.4214489204541,2.77634230298973,6.60754727256618,7.71731368102561,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0.164230914106418,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06154382279153,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.327130788511688,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0.560544326627578,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 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|short_description=p7@CDK2 | |||
}} | }} |
Latest revision as of 09:23, 19 September 2015
Short description: | p7@CDK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CDK2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -11bp_to_ENST00000554545_5end |
EntrezGene: | CDK2 |
HGNC: | 1771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.74e-88 | 10 |
melanoblast | 4.74e-88 | 10 |
pigment cell | 6.50e-63 | 14 |
light melanocyte | 1.25e-54 | 3 |
neurecto-epithelial cell | 4.88e-44 | 20 |
columnar/cuboidal epithelial cell | 1.34e-32 | 27 |
ecto-epithelial cell | 7.34e-26 | 34 |
migratory neural crest cell | 2.08e-20 | 41 |
dark melanocyte | 8.95e-20 | 1 |
neurectodermal cell | 2.59e-14 | 59 |
ectodermal cell | 9.61e-12 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.52e-36 | 2 |