FFCP PHASE1:Hg19::chr4:26492076..26492113,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=886 | |EntrezGene=886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1570 | |HGNC=1570 | ||
|TSSclassifier=strong | |||
|UniProt=P32238 | |UniProt=P32238 | ||
|association_with_transcript=0bp_to_ENST00000295589_5end | |association_with_transcript=0bp_to_ENST00000295589_5end | ||
|cluster_id=chr4:26492076..26492113,- | |||
|coexpression_cluster_id=C4405 | |||
|description=CAGE_peak_1_at_CCKAR_5end | |description=CAGE_peak_1_at_CCKAR_5end | ||
|id=chr4:26492076..26492113,- | |id=chr4:26492076..26492113,- | ||
|ontology_enrichment_celltype=CL:0000062!5.38e-11!11;CL:0000375!5.38e-11!11;CL:0000335!5.38e-11!11;CL:0000135!2.38e-07!3;CL:0000386!2.38e-07!3;CL:0000388!2.38e-07!3;CL:0000153!2.94e-07!9;CL:0000447!2.94e-07!9 | |ontology_enrichment_celltype=CL:0000062!5.38e-11!11;CL:0000375!5.38e-11!11;CL:0000335!5.38e-11!11;CL:0000135!2.38e-07!3;CL:0000386!2.38e-07!3;CL:0000388!2.38e-07!3;CL:0000153!2.94e-07!9;CL:0000447!2.94e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000062;3.15e-30;9!CL:0000135;2.24e-18;3!CL:0000388;2.24e-18;3!CL:0000650;7.67e-12;2!CL:1000500;7.67e-12;2!CL:1000618;7.67e-12;2!CL:1001318;7.67e-12;2!CL:0002173;7.67e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.61e-24,11;CL:0000375,1.61e-24,11;CL:0000335,1.61e-24,11;CL:0000135,2.31e-18,3;CL:0000388,2.31e-18,3;CL:0000650,7.67e-12,2;CL:1000500,7.67e-12,2;CL:1000618,7.67e-12,2;CL:1001318,7.67e-12,2;CL:0002173,7.67e-12,2 | |||
|ontology_enrichment_development_v019=CL:0000335;1.40e-24;11!UBERON:0006242;2.22e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;5.49e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.39e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.05e-10!115;UBERON:0000043!2.38e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.24e-18;3!UBERON:0000043;2.24e-18;3!UBERON:0007845;2.24e-18;3!UBERON:0000341;1.77e-12;2!UBERON:0003127;7.67e-12;2!UBERON:0003567;7.67e-12;2!UBERON:0003838;7.67e-12;2!UBERON:0003586;7.67e-12;2!UBERON:0005169;7.67e-12;2!UBERON:0002321;7.67e-12;2!UBERON:0005215;7.67e-12;2!UBERON:0002303;7.67e-12;2!UBERON:0002319;7.67e-12;2!UBERON:0001723;3.50e-08;3!UBERON:0001033;3.50e-08;3!UBERON:0002372;5.06e-07;1!UBERON:0001961;5.06e-07;1!UBERON:0001744;5.06e-07;1!UBERON:0001042;5.06e-07;1!UBERON:0001735;5.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.31e-18,3;UBERON:0000043,2.31e-18,3;UBERON:0007845,2.31e-18,3;UBERON:0000341,1.67e-12,2;UBERON:0003567,7.67e-12,2;UBERON:0003838,7.67e-12,2;UBERON:0003586,7.67e-12,2;UBERON:0005169,7.67e-12,2;UBERON:0002321,7.67e-12,2;UBERON:0005215,7.67e-12,2;UBERON:0002303,7.67e-12,2;UBERON:0002319,7.67e-12,2;UBERON:0003127,8.57e-12,2;UBERON:0001723,3.37e-08,3;UBERON:0001033,3.37e-08,3;UBERON:0010056,3.37e-08,3;UBERON:0002372,5.06e-07,1;UBERON:0001961,5.06e-07,1;UBERON:0001744,5.06e-07,1;UBERON:0001735,5.06e-07,1 | |||
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| ||
|short_description=p1@CCKAR | |short_description=p1@CCKAR | ||
}} | }} |
Latest revision as of 11:31, 17 September 2015
Short description: | p1@CCKAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCKAR_5end |
Coexpression cluster: | C4405_tenocyte_Osteoblast_gall_temporal_duodenum_stomach_peripheral |
Association with transcript: | 0bp_to_ENST00000295589_5end |
EntrezGene: | CCKAR |
HGNC: | 1570 |
UniProt: | P32238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.61e-24 | 11 |
osteoprogenitor cell | 1.61e-24 | 11 |
mesenchyme condensation cell | 1.61e-24 | 11 |
fibrocyte | 2.31e-18 | 3 |
tendon cell | 2.31e-18 | 3 |
mesangial cell | 7.67e-12 | 2 |
kidney interstitial cell | 7.67e-12 | 2 |
juxtaglomerular complex cell | 7.67e-12 | 2 |
renal interstitial pericyte | 7.67e-12 | 2 |
extraglomerular mesangial cell | 7.67e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.31e-18 | 3 |
tendon | 2.31e-18 | 3 |
regular connective tissue | 2.31e-18 | 3 |
throat | 1.67e-12 | 2 |
abdomen connective tissue | 7.67e-12 | 2 |
abdominal segment connective tissue | 7.67e-12 | 2 |
trunk connective tissue | 7.67e-12 | 2 |
interstitial tissue | 7.67e-12 | 2 |
extraglomerular mesangium | 7.67e-12 | 2 |
kidney interstitium | 7.67e-12 | 2 |
juxtaglomerular apparatus | 7.67e-12 | 2 |
mesangium | 7.67e-12 | 2 |
open tracheal system trachea | 8.57e-12 | 2 |
tongue | 3.37e-08 | 3 |
gustatory system | 3.37e-08 | 3 |
future tongue | 3.37e-08 | 3 |
tonsil | 5.06e-07 | 1 |
mucosa-associated lymphoid tissue | 5.06e-07 | 1 |
lymphoid tissue | 5.06e-07 | 1 |
tonsillar ring | 5.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.39e-12 | 2 |