FFCP PHASE1:Hg19::chr12:56122220..56122248,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:56122220..56122248,-
|short_description=p4@CD63
|description=CAGE_peak_4_at_CD63_5end
|association_with_transcript=0bp_to_uc001shm.2_5end
|EntrezGene=967...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=967 | |EntrezGene=967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1692 | |HGNC=1692 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001shm.2_5end | |||
|cluster_id=chr12:56122220..56122248,- | |||
|coexpression_cluster_id=C2219 | |||
|description=CAGE_peak_4_at_CD63_5end | |||
|id=chr12:56122220..56122248,- | |||
|ontology_enrichment_celltype=CL:0000055!6.22e-31!180;CL:0000548!7.59e-30!679;CL:0000004!7.59e-30!679;CL:0000255!7.59e-30!679;CL:0000012!2.33e-29!682;CL:0000144!1.87e-25!625;CL:0002371!2.97e-25!591;CL:0000680!1.72e-22!57;CL:0000056!1.72e-22!57;CL:0000355!1.72e-22!57;CL:0000222!2.88e-22!119;CL:0000183!1.89e-21!59;CL:0000187!1.12e-20!54;CL:0000192!2.41e-20!42;CL:0000514!2.41e-20!42;CL:0000220!4.20e-20!246;CL:0002321!1.72e-19!248;CL:0000393!1.79e-16!60;CL:0000211!1.79e-16!60;CL:0000003!2.13e-16!722;CL:0000359!6.11e-16!32;CL:0000048!1.04e-12!430;CL:0000723!9.71e-12!436;CL:0000057!1.38e-11!75;CL:0000034!7.50e-11!444;CL:0000063!1.20e-08!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.40e-16;32!CL:0000192;2.22e-15;43!CL:0000187;5.07e-12;55!CL:0000134;2.97e-11;55!CL:0000048;2.86e-09;58!CL:0000723;2.90e-09;61!CL:0000393;1.65e-08;61!CL:0000211;1.65e-08;61!CL:0000034;5.58e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.22e-24,58;CL:0000056,1.22e-24,58;CL:0000355,1.22e-24,58;CL:0000187,1.13e-22,55;CL:0000222,1.71e-22,121;CL:0000192,5.91e-22,43;CL:0000514,5.91e-22,43;CL:0002321,3.84e-18,250;CL:0000393,1.42e-17,61;CL:0000211,1.42e-17,61;CL:0000359,4.05e-17,32;CL:0000048,7.05e-15,427;CL:0000723,6.84e-14,433;CL:0000034,9.75e-13,441;CL:0000057,9.27e-12,76 | |||
|ontology_enrichment_development_v019=CL:0000514;2.22e-15;43!CL:0000355;2.33e-12;58 | |||
|ontology_enrichment_disease=DOID:2394!1.70e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.18e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.58e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.56e-21!83;UBERON:0002329!1.56e-21!83;UBERON:0003077!1.56e-21!83;UBERON:0003059!1.56e-21!83;UBERON:0007282!1.56e-21!83;UBERON:0009618!1.56e-21!83;UBERON:0007285!1.56e-21!83;UBERON:0004290!1.46e-20!70;UBERON:0000486!3.19e-19!82;UBERON:0001134!1.90e-18!61;UBERON:0002036!1.90e-18!61;UBERON:0003082!1.90e-18!61;UBERON:0005256!1.04e-17!143;UBERON:0002385!7.68e-17!63;UBERON:0001015!7.68e-17!63;UBERON:0000383!7.68e-17!63;UBERON:0000926!3.55e-16!448;UBERON:0004120!3.55e-16!448;UBERON:0006603!3.55e-16!448;UBERON:0002100!4.47e-15!216;UBERON:0002204!1.69e-14!167;UBERON:0001637!1.81e-14!42;UBERON:0003509!1.81e-14!42;UBERON:0004572!1.81e-14!42;UBERON:0002049!3.82e-13!79;UBERON:0007798!3.82e-13!79;UBERON:0003104!1.74e-12!238;UBERON:0009142!1.74e-12!238;UBERON:0004573!2.94e-12!33;UBERON:0004571!2.94e-12!33;UBERON:0003914!6.15e-11!118;UBERON:0000490!6.78e-11!138;UBERON:0001981!6.99e-11!60;UBERON:0007500!6.99e-11!60;UBERON:0004537!6.99e-11!60;UBERON:0006965!6.99e-11!60;UBERON:0000055!1.08e-10!69;UBERON:0004872!6.12e-09!84;UBERON:0000468!2.13e-08!659;UBERON:0000467!6.37e-08!625;UBERON:0000480!9.58e-08!626;UBERON:0004535!2.86e-07!110;UBERON:0001009!5.78e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.78e-12;33!UBERON:0004571;9.78e-12;33!UBERON:0001637;6.66e-11;42!UBERON:0003509;6.66e-11;42!UBERON:0004572;6.66e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.02e-23,78;UBERON:0002329,2.77e-23,71;UBERON:0003059,2.77e-23,71;UBERON:0007282,2.77e-23,71;UBERON:0004290,2.77e-23,71;UBERON:0009618,2.77e-23,71;UBERON:0007524,1.58e-22,73;UBERON:0003077,1.80e-22,72;UBERON:0007285,1.80e-22,72;UBERON:0000486,1.87e-21,83;UBERON:0001134,5.39e-21,62;UBERON:0002036,5.39e-21,62;UBERON:0003082,5.39e-21,62;UBERON:0002385,2.22e-19,64;UBERON:0001015,2.22e-19,64;UBERON:0000383,2.22e-19,64;UBERON:0005256,4.50e-16,122;UBERON:0001637,4.19e-15,42;UBERON:0003509,4.19e-15,42;UBERON:0004572,4.19e-15,42;UBERON:0003104,4.21e-15,160;UBERON:0009142,4.21e-15,160;UBERON:0002100,7.68e-15,199;UBERON:0002204,1.49e-14,167;UBERON:0000490,3.85e-14,148;UBERON:0004573,1.06e-12,33;UBERON:0004571,1.06e-12,33;UBERON:0002049,1.26e-12,78;UBERON:0007798,1.26e-12,78;UBERON:0000926,2.95e-12,315;UBERON:0004120,2.95e-12,315;UBERON:0006603,2.95e-12,315;UBERON:0003914,1.04e-10,117;UBERON:0007500,2.01e-10,59;UBERON:0001981,2.01e-10,59;UBERON:0004537,2.01e-10,59;UBERON:0006965,2.01e-10,59;UBERON:0000055,4.28e-10,68;UBERON:0004872,1.62e-08,83;UBERON:0004535,6.55e-08,109;UBERON:0001009,1.64e-07,112 | |||
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| ||
|short_description=p4@CD63 | |||
}} | }} |
Latest revision as of 08:14, 19 September 2015
Short description: | p4@CD63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD63_5end |
Coexpression cluster: | C2219_Smooth_Mesenchymal_Pericytes_mesenchymal_Melanocyte_Preadipocyte_Monocytederived |
Association with transcript: | 0bp_to_uc001shm.2_5end |
EntrezGene: | CD63 |
HGNC: | 1692 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.22e-24 | 58 |
myoblast | 1.22e-24 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-24 | 58 |
muscle cell | 1.13e-22 | 55 |
mesodermal cell | 1.71e-22 | 121 |
smooth muscle cell | 5.91e-22 | 43 |
smooth muscle myoblast | 5.91e-22 | 43 |
embryonic cell | 3.84e-18 | 250 |
electrically responsive cell | 1.42e-17 | 61 |
electrically active cell | 1.42e-17 | 61 |
vascular associated smooth muscle cell | 4.05e-17 | 32 |
multi fate stem cell | 7.05e-15 | 427 |
somatic stem cell | 6.84e-14 | 433 |
stem cell | 9.75e-13 | 441 |
fibroblast | 9.27e-12 | 76 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.58e-08 | 14 |