FFCP PHASE1:Hg19::chr4:22746456..22746467,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:22746456..22746467,- | |||
|coexpression_cluster_id=C826 | |||
|description=CAGE_peak_at_chr4:22746456..22746467,- | |description=CAGE_peak_at_chr4:22746456..22746467,- | ||
|id=chr4:22746456..22746467,- | |id=chr4:22746456..22746467,- | ||
|ontology_enrichment_celltype=CL:0000080!7.19e-22!6;CL:0000946!7.46e-16!1;CL:0000786!7.46e-16!1;CL:0000980!7.46e-16!1;CL:0000945!6.07e-10!24;CL:0000826!6.07e-10!24;CL:0000785!1.39e-08!2;CL:0000955!1.39e-08!2;CL:0000818!1.39e-08!2;CL:0000954!1.39e-08!2;CL:0000816!1.39e-08!2;CL:0000838!6.06e-07!52;CL:0000542!8.24e-07!53;CL:0000051!8.24e-07!53;CL:0000988!9.40e-07!182 | |ontology_enrichment_celltype=CL:0000080!7.19e-22!6;CL:0000946!7.46e-16!1;CL:0000786!7.46e-16!1;CL:0000980!7.46e-16!1;CL:0000945!6.07e-10!24;CL:0000826!6.07e-10!24;CL:0000785!1.39e-08!2;CL:0000955!1.39e-08!2;CL:0000818!1.39e-08!2;CL:0000954!1.39e-08!2;CL:0000816!1.39e-08!2;CL:0000838!6.06e-07!52;CL:0000542!8.24e-07!53;CL:0000051!8.24e-07!53;CL:0000988!9.40e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.58e-26;1!CL:0000786;3.58e-26;1!CL:0000945;4.61e-17;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.58e-26,1;CL:0000786,3.58e-26,1;CL:0000980,3.58e-26,1;CL:0000945,4.81e-17,24;CL:0000826,4.81e-17,24;CL:0000785,8.28e-14,2;CL:0000955,8.28e-14,2;CL:0000818,8.28e-14,2;CL:0000954,8.28e-14,2;CL:0000816,8.28e-14,2;CL:0000838,3.02e-12,52;CL:0000542,5.08e-12,53;CL:0000051,5.08e-12,53;CL:0000817,1.19e-09,3;CL:0000988,6.97e-09,177;CL:0002087,8.22e-08,115;CL:0002031,1.73e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;8.28e-14;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001154!2.06e-15!1;UBERON:0001153!2.06e-15!1;UBERON:0002372!2.38e-15!1;UBERON:0001961!2.38e-15!1;UBERON:0001744!2.38e-15!1;UBERON:0001735!2.38e-15!1;UBERON:0002331!2.16e-13!10;UBERON:0000358!2.16e-13!10;UBERON:0000307!2.16e-13!10;UBERON:0000091!2.16e-13!10;UBERON:0000087!2.16e-13!10;UBERON:0007806!2.16e-13!10;UBERON:0008780!2.16e-13!10;UBERON:0005728!2.16e-13!10;UBERON:0000178!4.01e-09!15;UBERON:0000179!4.01e-09!15;UBERON:0000463!4.01e-09!15;UBERON:0000341!3.08e-08!2;UBERON:0001155!3.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.46e-11;10!UBERON:0000178;1.65e-07;15!UBERON:0000179;1.65e-07;15!UBERON:0000463;1.65e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.89e-11,10;UBERON:0000358,8.89e-11,10;UBERON:0000307,8.89e-11,10;UBERON:0000091,8.89e-11,10;UBERON:0000087,8.89e-11,10;UBERON:0007010,8.89e-11,10;UBERON:0007806,8.89e-11,10;UBERON:0008780,8.89e-11,10;UBERON:0005728,8.89e-11,10;UBERON:0000178,1.70e-07,15;UBERON:0000179,1.70e-07,15;UBERON:0000463,1.70e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21598876669059,2.79142004129816,2.20390187678302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24564449799115,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,1.18608451472249,0.988511511572023,1.04421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53514772622714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21598876669059,2.79142004129816,2.20390187678302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24564449799115,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,1.18608451472249,0.988511511572023,1.04421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53514772622714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:22746456..22746467,- | |short_description=p@chr4:22746456..22746467,- | ||
}} | }} |
Latest revision as of 04:25, 30 July 2015
Short description: | p@chr4:22746456..22746467, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:22746456..22746467, - |
Coexpression cluster: | C826_hairy_B_mycosis_cord_xeroderma_neuroblastoma_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.58e-26 | 1 |
plasma cell | 3.58e-26 | 1 |
plasmablast | 3.58e-26 | 1 |
lymphocyte of B lineage | 4.81e-17 | 24 |
pro-B cell | 4.81e-17 | 24 |
mature B cell | 8.28e-14 | 2 |
pre-B-II cell | 8.28e-14 | 2 |
transitional stage B cell | 8.28e-14 | 2 |
small pre-B-II cell | 8.28e-14 | 2 |
immature B cell | 8.28e-14 | 2 |
lymphoid lineage restricted progenitor cell | 3.02e-12 | 52 |
lymphocyte | 5.08e-12 | 53 |
common lymphoid progenitor | 5.08e-12 | 53 |
precursor B cell | 1.19e-09 | 3 |
hematopoietic cell | 6.97e-09 | 177 |
nongranular leukocyte | 8.22e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.73e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.89e-11 | 10 |
blastocyst | 8.89e-11 | 10 |
blastula | 8.89e-11 | 10 |
bilaminar disc | 8.89e-11 | 10 |
inner cell mass | 8.89e-11 | 10 |
cleaving embryo | 8.89e-11 | 10 |
connecting stalk | 8.89e-11 | 10 |
inner cell mass derived epiblast | 8.89e-11 | 10 |
extraembryonic mesoderm | 8.89e-11 | 10 |
blood | 1.70e-07 | 15 |
haemolymphatic fluid | 1.70e-07 | 15 |
organism substance | 1.70e-07 | 15 |