FFCP PHASE1:Hg19::chr1:170242760..170242801,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284688 | |EntrezGene=284688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=416bp_to_BC125144_5end | |association_with_transcript=416bp_to_BC125144_5end | ||
|cluster_id=chr1:170242760..170242801,- | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_1_at_LOC284688_5end | |description=CAGE_peak_1_at_LOC284688_5end | ||
|id=chr1:170242760..170242801,- | |id=chr1:170242760..170242801,- | ||
|ontology_enrichment_celltype=CL:0002617!3.33e-11!2 | |ontology_enrichment_celltype=CL:0002617!3.33e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.66e-23;3!CL:0000622;1.71e-14;5!CL:0000154;2.59e-12;6!CL:0000062;1.04e-08;9!CL:0000150;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.27e-23,3;CL:0000622,1.60e-14,5;CL:0000154,2.45e-12,6;CL:0000150,1.12e-08,9;CL:0000062,2.32e-07,11;CL:0000375,2.32e-07,11;CL:0000335,2.32e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.71e-14;5!CL:0000335;2.32e-07;11 | |||
|ontology_enrichment_disease=DOID:154!5.26e-11!2;DOID:4236!5.26e-11!2 | |ontology_enrichment_disease=DOID:154!5.26e-11!2;DOID:4236!5.26e-11!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!2.09e-11!2;UBERON:0001013!4.31e-09!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.71e-14;5!UBERON:0001044;2.59e-12;6!UBERON:0003293;2.59e-12;6!UBERON:0003294;2.59e-12;6!UBERON:0010047;2.59e-12;6!UBERON:0003408;2.59e-12;6!UBERON:0000167;2.59e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.83e-14,5;UBERON:0004117,1.83e-14,5;UBERON:0007689,1.83e-14,5;UBERON:0007123,1.83e-14,5;UBERON:0003091,1.83e-14,5;UBERON:0001044,2.45e-12,6;UBERON:0003293,2.45e-12,6;UBERON:0003294,2.45e-12,6;UBERON:0010047,2.45e-12,6;UBERON:0000167,2.45e-12,6;UBERON:0003408,6.13e-08,10;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p1@LOC284688 | |short_description=p1@LOC284688 | ||
}} | }} |
Latest revision as of 13:55, 18 September 2015
Short description: | p1@LOC284688 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC284688_5end |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | 416bp_to_BC125144_5end |
EntrezGene: | LOC284688 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.27e-23 | 3 |
acinar cell | 1.60e-14 | 5 |
protein secreting cell | 2.45e-12 | 6 |
glandular epithelial cell | 1.12e-08 | 9 |
osteoblast | 2.32e-07 | 11 |
osteoprogenitor cell | 2.32e-07 | 11 |
mesenchyme condensation cell | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.83e-14 | 5 |
pharyngeal pouch | 1.83e-14 | 5 |
thyroid diverticulum | 1.83e-14 | 5 |
pharyngeal pouch 2 | 1.83e-14 | 5 |
thyroid primordium | 1.83e-14 | 5 |
saliva-secreting gland | 2.45e-12 | 6 |
gland of oral region | 2.45e-12 | 6 |
gland of foregut | 2.45e-12 | 6 |
oral gland | 2.45e-12 | 6 |
oral cavity | 2.45e-12 | 6 |
gland of gut | 6.13e-08 | 10 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |