FFCP PHASE1:Hg19::chr1:164600184..164600191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000482110_5end | |association_with_transcript=-26bp_to_ENST00000482110_5end | ||
|cluster_id=chr1:164600184..164600191,+ | |||
|coexpression_cluster_id=C326 | |||
|description=CAGE_peak_38_at_PBX1_5end | |description=CAGE_peak_38_at_PBX1_5end | ||
|id=chr1:164600184..164600191,+ | |id=chr1:164600184..164600191,+ | ||
|ontology_enrichment_celltype=CL:0002150!2.78e-16!3;CL:0000861!2.78e-16!3;CL:0000319!1.82e-13!1;CL:0000159!2.28e-07!2;CL:1000415!3.09e-07!2 | |ontology_enrichment_celltype=CL:0002150!2.78e-16!3;CL:0000861!2.78e-16!3;CL:0000319!1.82e-13!1;CL:0000159!2.28e-07!2;CL:1000415!3.09e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.58e-34;1!CL:0000159;6.48e-18;2!CL:0000082;6.36e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.58e-34,1;CL:0000159,6.48e-18,2;CL:0000082,6.36e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.13e-10;30 | |||
|ontology_enrichment_disease=DOID:3030!1.82e-13!1;DOID:305!5.98e-08!106;DOID:1324!1.09e-07!15;DOID:0050615!3.08e-07!16 | |ontology_enrichment_disease=DOID:3030!1.82e-13!1;DOID:305!5.98e-08!106;DOID:1324!1.09e-07!15;DOID:0050615!3.08e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:3030;2.58e-34;1!DOID:4556;2.74e-12;3!DOID:1324;8.85e-10;15!DOID:0050615;3.14e-09;16!DOID:3908;6.78e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.58e-34,1;DOID:4556,2.59e-12,3;DOID:1324,8.85e-10,15;DOID:0050615,3.14e-09,16;DOID:305,3.15e-08,106;DOID:3908,6.55e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002294!8.64e-08!7;UBERON:0001173!8.64e-08!7;UBERON:0004912!8.64e-08!7;UBERON:0004807!6.08e-07!28 | |ontology_enrichment_uberon=UBERON:0002294!8.64e-08!7;UBERON:0001173!8.64e-08!7;UBERON:0004912!8.64e-08!7;UBERON:0004807!6.08e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.12e-09;4!UBERON:0003928;1.12e-09;4!UBERON:0004802;6.36e-08;19!UBERON:0000115;6.36e-08;19!UBERON:0002048;5.74e-07;22!UBERON:0004807;5.74e-07;22!UBERON:0000117;5.74e-07;22!UBERON:0000171;5.74e-07;22!UBERON:0000170;5.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,6.36e-08,19;UBERON:0000115,6.36e-08,19;UBERON:0002048,5.74e-07,22;UBERON:0000117,5.74e-07,22;UBERON:0000171,5.74e-07,22;UBERON:0000170,5.74e-07,22;UBERON:0005597,5.74e-07,22;UBERON:0000118,5.74e-07,22;UBERON:0002394,7.17e-07,6;UBERON:0003928,7.17e-07,6 | |||
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|short_description=p38@PBX1 | |short_description=p38@PBX1 | ||
}} | }} |
Latest revision as of 09:21, 18 September 2015
Short description: | p38@PBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_PBX1_5end |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | -26bp_to_ENST00000482110_5end |
EntrezGene: | PBX1 |
HGNC: | 8632 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.58e-34 | 1 |
seromucus secreting cell | 6.48e-18 | 2 |
epithelial cell of lung | 6.36e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 6.36e-08 | 19 |
lung epithelium | 6.36e-08 | 19 |
lung | 5.74e-07 | 22 |
respiratory tube | 5.74e-07 | 22 |
respiration organ | 5.74e-07 | 22 |
pair of lungs | 5.74e-07 | 22 |
lung primordium | 5.74e-07 | 22 |
lung bud | 5.74e-07 | 22 |
bile duct | 7.17e-07 | 6 |
digestive system duct | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.58e-34 | 1 |
lung large cell carcinoma | 2.59e-12 | 3 |
lung cancer | 8.85e-10 | 15 |
respiratory system cancer | 3.14e-09 | 16 |
carcinoma | 3.15e-08 | 106 |
non-small cell lung carcinoma | 6.55e-08 | 5 |