FFCP PHASE1:Hg19::chr4:16036122..16036130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:16036122..16036130,- | |||
|description=CAGE_peak_at_chr4:16036122..16036130,- | |description=CAGE_peak_at_chr4:16036122..16036130,- | ||
|id=chr4:16036122..16036130,- | |id=chr4:16036122..16036130,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002586;2.74e-12;3!CL:0000149;1.50e-09;4!CL:0000333;5.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,3.24e-12,3;CL:0000149,1.70e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.33e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4362;6.78e-08;5!DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.55e-08,5;DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000200!1.03e-09!6;UBERON:0001869!3.71e-09!32;UBERON:0001893!1.57e-08!34;UBERON:0001950!9.49e-08!20;UBERON:0002791!3.58e-07!33;UBERON:0002619!5.39e-07!22;UBERON:0002020!6.32e-07!34;UBERON:0003528!6.32e-07!34;UBERON:0002780!8.18e-07!41;UBERON:0001890!8.18e-07!41;UBERON:0006240!8.18e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;6.48e-18;2!UBERON:0001781;2.74e-12;3!UBERON:0001782;2.74e-12;3!UBERON:0000013;5.35e-08;5!UBERON:0002410;5.35e-08;5!UBERON:0000966;6.78e-08;5!UBERON:0005388;6.78e-08;5!UBERON:0001802;6.78e-08;5!UBERON:0000002;8.72e-07;6!UBERON:0001560;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,3.24e-12,3;UBERON:0005424,3.24e-12,3;UBERON:0001781,1.70e-09,4;UBERON:0000013,5.35e-08,5;UBERON:0002410,5.35e-08,5;UBERON:0000002,8.48e-07,6;UBERON:0001560,8.48e-07,6;UBERON:0000966,9.49e-07,6;UBERON:0005388,9.49e-07,6;UBERON:0001802,9.49e-07,6 | |||
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| ||
|short_description=p@chr4:16036122..16036130,- | |short_description=p@chr4:16036122..16036130,- | ||
}} | }} |
Latest revision as of 02:55, 30 July 2015
Short description: | p@chr4:16036122..16036130, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:16036122..16036130, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 3.24e-12 | 3 |
visual pigment cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 3.24e-12 | 3 |
presumptive retinal pigmented epithelium | 3.24e-12 | 3 |
layer of retina | 1.70e-09 | 4 |
sympathetic nervous system | 5.35e-08 | 5 |
autonomic nervous system | 5.35e-08 | 5 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |
retina | 9.49e-07 | 6 |
photoreceptor array | 9.49e-07 | 6 |
posterior segment of eyeball | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.55e-08 | 5 |
neuroendocrine tumor | 7.17e-07 | 6 |