FFCP PHASE1:Hg19::chr12:53071270..53071311,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:53071270..53071311,-
|short_description=p2@KRT1
|description=CAGE_peak_2_at_KRT1_5end
|association_with_transcript=0bp_to_ENST00000548765_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3848 | |EntrezGene=3848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6412 | |HGNC=6412 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000548765_5end | |||
|cluster_id=chr12:53071270..53071311,- | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_2_at_KRT1_5end | |||
|id=chr12:53071270..53071311,- | |||
|ontology_enrichment_celltype=CL:0000624!1.59e-14!6;CL:0002031!2.56e-13!124;CL:0002274!3.24e-13!5;CL:0000457!3.24e-13!5;CL:0002191!3.24e-13!5;CL:0000097!3.24e-13!5;CL:0000831!3.24e-13!5;CL:0002028!3.24e-13!5;CL:0000738!2.01e-12!140;CL:0000037!3.29e-11!172;CL:0000566!3.29e-11!172;CL:0000791!3.71e-11!18;CL:0000789!3.71e-11!18;CL:0002420!3.71e-11!18;CL:0002419!3.71e-11!18;CL:0000790!3.71e-11!18;CL:0000084!4.54e-11!25;CL:0000827!4.54e-11!25;CL:0000988!5.06e-10!182;CL:0002032!7.98e-10!165;CL:0000837!7.98e-10!165;CL:0000840!1.57e-08!5;CL:0001029!1.57e-08!5;CL:0000898!5.20e-08!3;CL:0002087!1.32e-07!119;CL:0000623!3.06e-07!3;CL:0000825!3.06e-07!3;CL:0000163!4.58e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.03e-29;6!CL:0000097;1.35e-26;5!CL:0000084;1.06e-21;25!CL:0000791;1.98e-20;18!CL:0000789;1.98e-20;18!CL:0002419;1.98e-20;18!CL:0000898;2.20e-15;3!CL:0000163;1.16e-14;9!CL:0000815;8.65e-11;2!CL:0000792;8.65e-11;2!CL:0002677;8.65e-11;2!CL:0000542;1.75e-07;53!CL:0000623;2.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.03e-29,6;CL:0000097,1.35e-26,5;CL:0002028,1.35e-26,5;CL:0000084,9.72e-22,25;CL:0000827,9.72e-22,25;CL:0000791,1.80e-20,18;CL:0000789,1.80e-20,18;CL:0002420,1.80e-20,18;CL:0002419,1.80e-20,18;CL:0000790,1.80e-20,18;CL:0000898,2.10e-15,3;CL:0000163,1.16e-14,9;CL:0000838,3.61e-13,52;CL:0000542,7.19e-13,53;CL:0000051,7.19e-13,53;CL:0000815,8.65e-11,2;CL:0000792,8.65e-11,2;CL:0002677,8.65e-11,2;CL:0002031,1.44e-10,120;CL:0000738,5.82e-10,136;CL:0000037,2.89e-07,168;CL:0000623,3.24e-07,3;CL:0000825,3.24e-07,3;CL:0002032,7.25e-07,161;CL:0000837,7.25e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.98e-20;18!CL:0000051;1.75e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.15e-08!112;UBERON:0002390!5.27e-08!102;UBERON:0003061!5.27e-08!102;UBERON:0004177!3.03e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@KRT1 | |||
}} | }} |
Latest revision as of 00:16, 19 September 2015
Short description: | p2@KRT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT1_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000548765_5end |
EntrezGene: | KRT1 |
HGNC: | 6412 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.03e-29 | 6 |
mast cell | 1.35e-26 | 5 |
basophil mast progenitor cell | 1.35e-26 | 5 |
T cell | 9.72e-22 | 25 |
pro-T cell | 9.72e-22 | 25 |
mature alpha-beta T cell | 1.80e-20 | 18 |
alpha-beta T cell | 1.80e-20 | 18 |
immature T cell | 1.80e-20 | 18 |
mature T cell | 1.80e-20 | 18 |
immature alpha-beta T cell | 1.80e-20 | 18 |
naive T cell | 2.10e-15 | 3 |
endocrine cell | 1.16e-14 | 9 |
lymphoid lineage restricted progenitor cell | 3.61e-13 | 52 |
lymphocyte | 7.19e-13 | 53 |
common lymphoid progenitor | 7.19e-13 | 53 |
regulatory T cell | 8.65e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.65e-11 | 2 |
naive regulatory T cell | 8.65e-11 | 2 |
hematopoietic lineage restricted progenitor cell | 1.44e-10 | 120 |
leukocyte | 5.82e-10 | 136 |
hematopoietic stem cell | 2.89e-07 | 168 |
natural killer cell | 3.24e-07 | 3 |
pro-NK cell | 3.24e-07 | 3 |
hematopoietic oligopotent progenitor cell | 7.25e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.25e-07 | 161 |