FFCP PHASE1:Hg19::chr12:52430722..52430738,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:52430722..52430738,-
|short_description=p@chr12:52430722..52430738,-
|description=CAGE_peak_at_chr12:52430722..52430738,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52430722..52430738,- | |||
|coexpression_cluster_id=C1672 | |||
|description=CAGE_peak_at_chr12:52430722..52430738,- | |||
|id=chr12:52430722..52430738,- | |||
|ontology_enrichment_celltype=CL:0002057!7.54e-31!42;CL:0000860!4.14e-28!45;CL:0000738!2.75e-23!140;CL:0000766!5.18e-21!76;CL:0002031!5.34e-19!124;CL:0000557!7.26e-19!71;CL:0002087!2.24e-18!119;CL:0002009!2.38e-17!65;CL:0000839!3.97e-17!70;CL:0002194!3.43e-16!63;CL:0000576!3.43e-16!63;CL:0000040!3.43e-16!63;CL:0000559!3.43e-16!63;CL:0000037!3.97e-14!172;CL:0000566!3.97e-14!172;CL:0000988!6.14e-13!182;CL:0002032!2.51e-12!165;CL:0000837!2.51e-12!165;CL:0000763!1.47e-09!112;CL:0000049!1.47e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.81e-40;33!CL:0002057;7.81e-40;33!CL:0000473;6.72e-28;39!CL:0000234;6.72e-28;39!CL:0000576;1.19e-26;48!CL:0000766;1.09e-20;69!CL:0002087;5.01e-11;104!CL:0000738;1.48e-09;136!CL:0002393;1.57e-08;6!CL:0002397;1.57e-08;6!CL:0000763;2.31e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.81e-51,42;CL:0002057,5.81e-51,42;CL:0000473,7.68e-45,48;CL:0000234,7.68e-45,48;CL:0000766,1.83e-39,72;CL:0000557,2.27e-38,67;CL:0000738,4.38e-38,136;CL:0000839,2.20e-35,66;CL:0002009,6.32e-35,61;CL:0002194,9.39e-33,59;CL:0000576,9.39e-33,59;CL:0000040,9.39e-33,59;CL:0000559,9.39e-33,59;CL:0002031,2.38e-32,120;CL:0002087,8.00e-30,115;CL:0000037,2.80e-26,168;CL:0000988,9.43e-25,177;CL:0002032,2.04e-23,161;CL:0000837,2.04e-23,161;CL:0000763,6.35e-23,108;CL:0000049,6.35e-23,108;CL:0000134,3.48e-09,354;CL:0002393,4.31e-09,9;CL:0002397,4.31e-09,9;CL:0002320,1.43e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-36;42!CL:0000049;7.73e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.16e-17!80;UBERON:0002390!3.04e-16!102;UBERON:0003061!3.04e-16!102;UBERON:0001474!4.97e-16!86;UBERON:0002193!1.24e-13!112;UBERON:0004765!6.51e-13!101;UBERON:0001434!6.51e-13!101;UBERON:0002405!1.54e-12!115;UBERON:0007023!5.72e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.33e-33,76;UBERON:0001474,1.90e-31,82;UBERON:0002390,1.15e-28,98;UBERON:0003061,1.15e-28,98;UBERON:0004765,3.85e-27,90;UBERON:0002405,9.87e-26,93;UBERON:0002193,2.37e-24,108;UBERON:0001434,9.22e-23,100;UBERON:0003081,7.38e-13,203;UBERON:0002204,2.04e-10,167;UBERON:0002384,4.34e-08,371 | |||
|phase1_expression=0,0.642301571672949,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.990130823680373,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,1.57345710739562,0.767658796194425,1.70297735647684,0,0,0,0,0,0.587200878669695,6.64794490238253,3.00816671205213,4.12320654360118,0,0,0,2.4717700592526,6.42389104270976,13.8272914877055,5.11343881192506,11.1015329765893,33.4482880566712,4.89077066947656,10.5025889676931,26.249527517633,18.961012440514,27.7558413941045,66.3589784312275,6.02375486536335,6.5497476013883,36.6299279645488,13.4676912643197,20.2185287057939,62.015701202507,1.31940520074686,4.9865914405408,9.80316926225197,3.19230162491442,10.2129340444405,35.5008681927478,8.29120595347253,7.82224377630302,37.7908589786903,3.63239701580021,13.6262725315399,35.7602497808199,4.43636101255078,8.07896339867165,3.35453832813401,8.31231870484064,2.55300717830561,1.12507910687956,3.70516566863623,2.38700012638908,0.365328307529268,3.51992488922645,1.63841583378639,0,0.853460445133014,1.20118796110804,1.72425731986345,0.661044872784862,2.86216126360609,14.2303242277362,7.04684627245127,8.41001101875504,62.1205244321422,7.8471198817415,0.526768169550154,2.360517241366,3.93010762749165,9.04646595597841,0,0.977766799900771,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0.164437904603676,0.276350017785848,0,0.296573126324121,0.267540828089713,0,0,0.766440987203842,0.34362744548263,0,0.318565414324097,0,0,0,0.255973222308837,0,0,0,2.21767417547206,1.06976078313403,1.59306844271079,0,0,1.02290049474824,0,0,0,0,0.486634870302636,0,0,0.175669571386252,1.63723844372141,0,0,0,0,0,0.953962497221368,1.71598473234038,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,7.75560528296651,0,0,0,0.397227542439656,2.86836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0.538168907066586,0,0,0.300091096084402,0,1.28820270022815,0,0.506328996723799,0,0.252433774244115,0,0,2.13005755509969,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0.982827216677626,2.95394953340702,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0.462985512576611,0,1.58040879591855,0,0,0,0,0,0,0,0.358234090811393,0,0,10.3459279958148,0,35.0384515263905,11.8178361801908,67.9184291833924,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,4.00338382242813,0,0,0,4.97548728239564,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,2.56139988262505,1.72502059887614,1.92514554419623,0,0,0,0,1.27587750330633,1.49801404789436,0,0.828831026872071,0.49076596687656,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,7.54999702865159,2.881644060693,0,0,0,0.248107807818777,1.53461973288062,0,0.128139149255701,0,0,0,0,0.710246901252508,0.657017248110473,0,2.20799719073923,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27947376023316,0,0.30982349809975,0,0.717056761020258,0,0,0,0.422215270595328,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,1.02555725490326,0,0,0,0.71623345421307,0,0.307160702099232,0,2.2507106625682,0.222617410045812,0,0,1.59398390600856,1.10513566212459,0,0.102268682502155,0.861593638227486,0,0.179736702294654,0.716084698702437,0,0.591860433821602,0,0,0,0.278304294485554,0,0.260427761085233,0.61221999997337,0.724999575434793,0,0.508507300585533,0,0,0.291604613383254,0.347249989866585,0,0.723578631752448,0,0,0.591095237907095,3.51016635446356,0.435753854075961,1.95193241990045,0.538651809526579,0.113942055847001,0,0,0,3.19001159731919,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0.141353071433941,0,0,0.796118080530053,0.611030144933625,3.85477467284809,0.370691816839509,0.208843899010911,5.99870083528026,2.40773294189637,1.87411556580271,0,4.89161547330224,0,4.73501283419269,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,1.46988596121566,0.0870592065804026,0.52418000472609,0,0,0.0730893170861856,0,0.581934098930517,0,1.58186518546373,0,0,0.443175571691151,1.36885967914362,0.0801588202515337,1.49417096317547,0,0,0,0.171594997861965,0.14405479798815,1.36677789121976,1.17847017308398,0,0,0,0,0,0,0,0.429765441419957,0.525774708558629,5.58564802544508,3.43740636017525,1.43574604915363,0.399358000997982,0.429226048136571,0.89268582976749,0.940568614814168,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0.681017030557878,0.321506296930038,0.275078873194468,0,2.0247650239635,30.952078182318,0.485996453264197,0,0.236417121897595,1.52118305591495,0.528001682597033,1.07572403599707,0,1.42939065274673,0,0.25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| ||
|short_description=p@chr12:52430722..52430738,- | |||
}} | }} |
Latest revision as of 09:26, 24 July 2015
Short description: | p@chr12:52430722..52430738, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52430722..52430738, - |
Coexpression cluster: | C1672_seminal_CD14_Mast_CD34_immature_mesenchymal_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.81e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.81e-51 | 42 |
defensive cell | 7.68e-45 | 48 |
phagocyte | 7.68e-45 | 48 |
myeloid leukocyte | 1.83e-39 | 72 |
granulocyte monocyte progenitor cell | 2.27e-38 | 67 |
leukocyte | 4.38e-38 | 136 |
myeloid lineage restricted progenitor cell | 2.20e-35 | 66 |
macrophage dendritic cell progenitor | 6.32e-35 | 61 |
monopoietic cell | 9.39e-33 | 59 |
monocyte | 9.39e-33 | 59 |
monoblast | 9.39e-33 | 59 |
promonocyte | 9.39e-33 | 59 |
hematopoietic lineage restricted progenitor cell | 2.38e-32 | 120 |
nongranular leukocyte | 8.00e-30 | 115 |
hematopoietic stem cell | 2.80e-26 | 168 |
hematopoietic cell | 9.43e-25 | 177 |
hematopoietic oligopotent progenitor cell | 2.04e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-23 | 161 |
myeloid cell | 6.35e-23 | 108 |
common myeloid progenitor | 6.35e-23 | 108 |
mesenchymal cell | 3.48e-09 | 354 |
intermediate monocyte | 4.31e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.31e-09 | 9 |
connective tissue cell | 1.43e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.33e-33 | 76 |
bone element | 1.90e-31 | 82 |
hematopoietic system | 1.15e-28 | 98 |
blood island | 1.15e-28 | 98 |
skeletal element | 3.85e-27 | 90 |
immune system | 9.87e-26 | 93 |
hemolymphoid system | 2.37e-24 | 108 |
skeletal system | 9.22e-23 | 100 |
lateral plate mesoderm | 7.38e-13 | 203 |
musculoskeletal system | 2.04e-10 | 167 |
connective tissue | 4.34e-08 | 371 |