FFCP PHASE1:Hg19::chr1:155225214..155225225,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10712 | |EntrezGene=10712 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1233 | |HGNC=1233 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000361361_5end | |association_with_transcript=-36bp_to_ENST00000361361_5end | ||
|cluster_id=chr1:155225214..155225225,- | |||
|description=CAGE_peak_4_at_FAM189B_5end | |description=CAGE_peak_4_at_FAM189B_5end | ||
|id=chr1:155225214..155225225,- | |id=chr1:155225214..155225225,- | ||
|ontology_enrichment_celltype=CL:0000066!6.26e-07!254 | |ontology_enrichment_celltype=CL:0000066!6.26e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.79e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.13e-15!312;UBERON:0000483!1.06e-14!309;UBERON:0000025!6.97e-13!194;UBERON:0004111!2.27e-11!241;UBERON:0000064!2.81e-10!219;UBERON:0000477!1.12e-09!286;UBERON:0000481!6.35e-09!347;UBERON:0000475!8.62e-08!365;UBERON:0001049!1.27e-07!57;UBERON:0005068!1.27e-07!57;UBERON:0006241!1.27e-07!57;UBERON:0007135!1.27e-07!57;UBERON:0002346!3.32e-07!90;UBERON:0002050!7.08e-07!605;UBERON:0005423!7.08e-07!605;UBERON:0000922!8.88e-07!612;UBERON:0000923!9.14e-07!604;UBERON:0005291!9.14e-07!604;UBERON:0006598!9.14e-07!604;UBERON:0002532!9.14e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;6.36e-08;32!UBERON:0003528;9.23e-08;34!UBERON:0002020;9.23e-08;34!UBERON:0001869;1.21e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.74e-10,53;UBERON:0002616,8.74e-10,53;UBERON:0001049,5.08e-09,56;UBERON:0005068,5.08e-09,56;UBERON:0006241,5.08e-09,56;UBERON:0007135,5.08e-09,56;UBERON:0003528,7.68e-09,34;UBERON:0002020,7.68e-09,34;UBERON:0002791,3.03e-08,32;UBERON:0001869,3.03e-08,32;UBERON:0000025,5.55e-08,192;UBERON:0001893,1.32e-07,34;UBERON:0000955,2.17e-07,68;UBERON:0006238,2.17e-07,68;UBERON:0002346,2.40e-07,86;UBERON:0000119,3.29e-07,309;UBERON:0003075,4.85e-07,82;UBERON:0007284,4.85e-07,82;UBERON:0004111,5.09e-07,240;UBERON:0002780,5.93e-07,41;UBERON:0001890,5.93e-07,41;UBERON:0003080,5.93e-07,41;UBERON:0006240,5.93e-07,41;UBERON:0000483,7.14e-07,306 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.893922188854576,0,0,0,0.261185628199839,0.737201809504527,4.18680700783456,0.436882744260345,0.263766978228454,0,0.331397375727916,0,0,0,0.487932798790507,0.61560529038394,1.22400414746552,0.940364164434263,0.286235987131057,0.547497700291537,1.00434111675842,0.305653622991805,0.0821005894499457,0.236132343941038,0,0,0,0.919421224478927,1.8072355126695,0,0.0774672005803016,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0.670700859703636,0.255725123687061,0,0,0.289693037921647,0,1.94653948121054,0.0945348171640679,0.221729397462564,1.40535657109002,0.327447688744282,0,0.741568885568859,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0.694281003215189,1.13061588384802,2.09749718104953,1.10047216776027,0.835979866147242,0,0,0,0,0,0.976248230192678,0.735326160691737,0.81014194788176,0.0892997282840798,0.673588117878509,1.57656072676651,3.06633274931766,0,0.916008719652036,0,0,2.18047026071267,0,0.379891534993739,0.264818361626438,0.573673241497627,1.06400514659507,0,0,0.98667019366864,0.622422070799533,0.538842688278752,0.163461903113459,0,0,0.70296429550139,1.87296046098192,0.570471821544449,1.19558944441441,0.822041490506354,0.647491777472526,0.421352420106746,0.204154171254893,0.491337269247072,1.13658359293342,0,0.494533858557114,0,0,0.505008341862199,0.375355559615893,0,0.438977620880838,0,0.300476117813194,0.453728732640084,0.179389635688862,0,0,0.600182192168805,0.309157587715317,0,0.37223371266318,0,0.487185025805993,0.252433774244115,0,0,0.355009592516614,0.403008392910561,0.169560592310488,0.193260853163297,0,1.14721838155602,0.365921118388786,0,0.116193942869518,0.518305275076852,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.473227200159376,0,0.241011029883482,0.220587945464788,0.653638332277218,0,0.269662616320329,0.196221465125346,0.769494313892781,0.738155454624648,1.40241773803446,0,0,0,0.982827216677626,0.590789906681404,0,0.368965315629341,0.857839051492628,0.768251997860379,0,0.301586917234893,0.462942225792648,0.325808305310325,2.07986957055916,0,0.231860809950154,0.352226082707465,0.577465791044295,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.358234090811393,0.290633938513962,1.53353071666084,0,0,0,0,0,0.253991577168676,0.381988425558278,0,1.71072446022705,0.719792448923265,0.300343057843917,2.00078502841405,0.336393253036082,1.74384027533312,0.07333828582095,0,0,0.845302752556,0.531876233169741,2.08014873822732,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0.823240336780769,0.325736184293735,0,1.58390374586686,0.602878754119172,0,0.699810938274399,0,0,0,0,1.14861935834114,2.85273810081437,0,1.2328579353023,0.716243852959582,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,1.00034104211935,0.542530047399471,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,1.29058417979192,0.173767228936166,0.391602314925481,0.343143423810856,0,0.215714200818617,0.106727557803444,0.303127571446259,0,1.20956117331872,0.496215615637554,0.153461973288062,0.280660094433074,0.128139149255701,1.02341449813341,0.804269605718038,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.581051892299796,0.120859449591622,0.40101294060657,0.920809889358963,0.114814448164607,0.364182336013434,0.262248829918848,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.680374821106063,0,1.54227252690289,0.812839312631559,0,0.254876273045038,1.66215201785745,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.824125183365091,0.330037999682352,0.574265537996172,2.60024098414608,1.6068392984416,0,0.616194468458578,0.307007349452259,0.275673144969061,0,0.145016693914229,0.852266274161009,0.0890320356467374,0.330569830721956,1.15314040419064,0.382838137483752,0.910420027699949,0,0.62962469366128,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0,0,0,0.38126038784765,0.255897791311334,0.855877976067841,0,0,0,0,0.706874414074119,0.202182481573316,0,0.842516912477962,0.975267478179181,1.70599442741899,0,0.409499734223957,0.282810863907425,1.13008116620243,1.10273068709225,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.92947049429925,0.563391205064483,0.430234056612155,0.589494246078727,0,0.709522128141196,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,3.35151137767894,0,0,0.86101074534246,5.05414427002877,0,0.459446800413919,0,0,0,0,0,0,0,0,0.854592569019785,0,0.490080431962063,0.185803175125719,0.144269212976445,0.213425530045242,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,0,0.169291777801603,0,0,0,0,0.614481528616916,0.447352215784832,0.333698283423817,0,0.278406173895242,1.23087398947712,0,0,0,0.93570270204109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|short_description=p4@FAM189B | |short_description=p4@FAM189B | ||
}} | }} |
Latest revision as of 12:05, 17 September 2015
Short description: | p4@FAM189B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM189B_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000361361_5end |
EntrezGene: | FAM189B |
HGNC: | 1233 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 8.74e-10 | 53 |
regional part of brain | 8.74e-10 | 53 |
neural tube | 5.08e-09 | 56 |
neural rod | 5.08e-09 | 56 |
future spinal cord | 5.08e-09 | 56 |
neural keel | 5.08e-09 | 56 |
brain grey matter | 7.68e-09 | 34 |
gray matter | 7.68e-09 | 34 |
regional part of telencephalon | 3.03e-08 | 32 |
cerebral hemisphere | 3.03e-08 | 32 |
tube | 5.55e-08 | 192 |
telencephalon | 1.32e-07 | 34 |
brain | 2.17e-07 | 68 |
future brain | 2.17e-07 | 68 |
neurectoderm | 2.40e-07 | 86 |
cell layer | 3.29e-07 | 309 |
neural plate | 4.85e-07 | 82 |
presumptive neural plate | 4.85e-07 | 82 |
anatomical conduit | 5.09e-07 | 240 |
regional part of forebrain | 5.93e-07 | 41 |
forebrain | 5.93e-07 | 41 |
anterior neural tube | 5.93e-07 | 41 |
future forebrain | 5.93e-07 | 41 |
epithelium | 7.14e-07 | 306 |