FFCP PHASE1:Hg19::chr1:154377758..154377778,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3570 | |EntrezGene=3570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6019 | |HGNC=6019 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000344086_5end | |association_with_transcript=59bp_to_ENST00000344086_5end | ||
|cluster_id=chr1:154377758..154377778,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_5_at_IL6R_5end | |description=CAGE_peak_5_at_IL6R_5end | ||
|id=chr1:154377758..154377778,+ | |id=chr1:154377758..154377778,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.93e-16!18;CL:0000789!2.93e-16!18;CL:0002420!2.93e-16!18;CL:0002419!2.93e-16!18;CL:0000790!2.93e-16!18;CL:0000838!1.02e-14!52;CL:0000542!3.40e-14!53;CL:0000051!3.40e-14!53;CL:0000084!1.69e-13!25;CL:0000827!1.69e-13!25;CL:0000625!9.74e-12!11;CL:0000738!2.28e-09!140;CL:0000988!9.09e-09!182;CL:0000037!2.11e-08!172;CL:0000566!2.11e-08!172;CL:0002087!1.01e-07!119;CL:0000624!1.57e-07!6;CL:0002032!1.91e-07!165;CL:0000837!1.91e-07!165;CL:0002031!5.01e-07!124 | |ontology_enrichment_celltype=CL:0000791!2.93e-16!18;CL:0000789!2.93e-16!18;CL:0002420!2.93e-16!18;CL:0002419!2.93e-16!18;CL:0000790!2.93e-16!18;CL:0000838!1.02e-14!52;CL:0000542!3.40e-14!53;CL:0000051!3.40e-14!53;CL:0000084!1.69e-13!25;CL:0000827!1.69e-13!25;CL:0000625!9.74e-12!11;CL:0000738!2.28e-09!140;CL:0000988!9.09e-09!182;CL:0000037!2.11e-08!172;CL:0000566!2.11e-08!172;CL:0002087!1.01e-07!119;CL:0000624!1.57e-07!6;CL:0002032!1.91e-07!165;CL:0000837!1.91e-07!165;CL:0002031!5.01e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.91e-42;18!CL:0000789;3.91e-42;18!CL:0002419;3.91e-42;18!CL:0000084;3.86e-29;25!CL:0000625;5.78e-27;11!CL:0000624;1.19e-19;6!CL:0000542;1.10e-12;53!CL:0000898;3.73e-11;3!CL:0000226;1.11e-09;3!CL:0000842;1.11e-09;3!CL:0000623;1.74e-09;3!CL:0000815;4.48e-08;2!CL:0000792;4.48e-08;2!CL:0002677;4.48e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.15e-42,18;CL:0000789,3.15e-42,18;CL:0002420,3.15e-42,18;CL:0002419,3.15e-42,18;CL:0000790,3.15e-42,18;CL:0000084,3.32e-29,25;CL:0000827,3.32e-29,25;CL:0000625,4.26e-27,11;CL:0000838,7.36e-26,52;CL:0000542,2.96e-25,53;CL:0000051,2.96e-25,53;CL:0000624,1.31e-19,6;CL:0002087,1.78e-12,115;CL:0000898,3.79e-11,3;CL:0000738,1.78e-10,136;CL:0000226,1.23e-09,3;CL:0000842,1.23e-09,3;CL:0000623,1.94e-09,3;CL:0000825,1.94e-09,3;CL:0002031,1.07e-08,120;CL:0000815,4.33e-08,2;CL:0000792,4.33e-08,2;CL:0002677,4.33e-08,2;CL:0000037,5.57e-08,168;CL:0000988,6.14e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000790;3.91e-42;18!CL:0000051;1.10e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-22!115;UBERON:0000178!7.28e-15!15;UBERON:0000179!7.28e-15!15;UBERON:0000463!7.28e-15!15 | |ontology_enrichment_uberon=UBERON:0007023!5.58e-22!115;UBERON:0000178!7.28e-15!15;UBERON:0000179!7.28e-15!15;UBERON:0000463!7.28e-15!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.79e-32;15!UBERON:0000179;2.79e-32;15!UBERON:0000463;2.79e-32;15!UBERON:0002390;1.05e-19;32!UBERON:0002193;7.76e-15;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.51e-32,15;UBERON:0000179,3.51e-32,15;UBERON:0000463,3.51e-32,15 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,1.6194683300949,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0.449446968890169,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,1.20118796110804,0,0,2.86216126360609,0.569212969109448,0,0,0,0,0,3.73748563216283,3.53709686474248,4.93443597598822,7.18901930179916,9.77766799900771,7.101717086021,17.534405556712,2.78526142212934,10.3112067616193,7.53215241584312,8.93652750424551,4.86747014957566,6.89314542067355,0.164437904603676,0.829050053357545,0.869409257205157,9.49034004237187,9.63146981122967,16.7256838087963,2.94604291013672,6.51474839123266,5.15441168223945,4.30133476433155,6.68987370080603,5.20866763085135,0.950452044448374,5.87242964403314,5.11946444617674,3.74792179657038,4.2619905367923,6.56902397536837,1.20964045934839,1.60464117470104,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0.728590576585084,0.370784442784429,0,0.174129737299267,0,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.432359860250884,0.6312121671319,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,2.15627574859517,1.54011643535698,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,2.27444828735176,2.80428461064202,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,5.07447609232169,5.35246044999663,3.98753031021914,3.57347663186684,3.70226045777575,3.8908398671563,2.16012574895246,3.96562588147135,0,0,0,0,0,0,0,0.798317485731266,0,0,0,0,0.456469358066384,0.313359791546046,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0.66614393599564,0,0.18714054040822,0.146508179271894,0.606802608747567,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,1.65770349318689,0.251932747854276,0,1.72318727645497,0,0,0,0,0.197286811273867,4.7896618469388,0,0,0.278304294485554,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0,0.139423744278603,0.461701551022782,0,0.46112780877612,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,1.05499032264014,0,0,0,2.98578579323551,0.353830258013357,0,1.18608451472249,0.617819694732514,0.730953646538188,0.067401132980677,0,0,0,0.586993856796269,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0.146178634172371,0.0821154570532092,0.581934098930517,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0.525774708558629,0.558564802544508,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0.315132729228895,0.329663433524666,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0.182248669974074,0,0.236417121897595,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,0,0.13223260174269,0.171086837884329,0,0.747511887973863,0.314408610199332,1.24271716604159,3.96932817449561,4.34745590175477,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0.573409195690071,0.332787154610557,0.124192805882767,0,0,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,1.36402216187572,0.132864840313363,0.817826971279221,0,0,0.211312123358627,0.39997479170986,0.106691729694141,2.2387947355906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.276629009856872,0.161475645631851,0,1.17777262201231,0.589848616738702,0.366857197043358,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.135075169236789,0,0.620060389503552,0.253663240775627,0,0.548257766857182,0,0,0,0,0,1.21393120847326,0.91064876540519,0.0887023701626388,0,0,0.0679697329768317,0.460409414939944,0.472775363535873,0,0.078493092850514,0.6284623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| ||
|short_description=p5@IL6R | |short_description=p5@IL6R | ||
}} | }} |
Latest revision as of 09:07, 17 September 2015
Short description: | p5@IL6R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IL6R_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 59bp_to_ENST00000344086_5end |
EntrezGene: | IL6R |
HGNC: | 6019 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.15e-42 | 18 |
alpha-beta T cell | 3.15e-42 | 18 |
immature T cell | 3.15e-42 | 18 |
mature T cell | 3.15e-42 | 18 |
immature alpha-beta T cell | 3.15e-42 | 18 |
T cell | 3.32e-29 | 25 |
pro-T cell | 3.32e-29 | 25 |
CD8-positive, alpha-beta T cell | 4.26e-27 | 11 |
lymphoid lineage restricted progenitor cell | 7.36e-26 | 52 |
lymphocyte | 2.96e-25 | 53 |
common lymphoid progenitor | 2.96e-25 | 53 |
CD4-positive, alpha-beta T cell | 1.31e-19 | 6 |
nongranular leukocyte | 1.78e-12 | 115 |
naive T cell | 3.79e-11 | 3 |
leukocyte | 1.78e-10 | 136 |
single nucleate cell | 1.23e-09 | 3 |
mononuclear cell | 1.23e-09 | 3 |
natural killer cell | 1.94e-09 | 3 |
pro-NK cell | 1.94e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 1.07e-08 | 120 |
regulatory T cell | 4.33e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.33e-08 | 2 |
naive regulatory T cell | 4.33e-08 | 2 |
hematopoietic stem cell | 5.57e-08 | 168 |
hematopoietic cell | 6.14e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.51e-32 | 15 |
haemolymphatic fluid | 3.51e-32 | 15 |
organism substance | 3.51e-32 | 15 |