FFCP PHASE1:Hg19::chr12:50643664..50643679,-: Difference between revisions
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|id=chr12:50643664..50643679,-
|short_description=p23@LIMA1
|description=CAGE_peak_23_at_LIMA1_5end
|association_with_transcript=0bp_to_ENST00000550592_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51474 | |EntrezGene=51474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24636 | |HGNC=24636 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVQ7 | |UniProt=F8VVQ7 | ||
|association_with_transcript=0bp_to_ENST00000550592_5end | |||
|cluster_id=chr12:50643664..50643679,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_23_at_LIMA1_5end | |||
|id=chr12:50643664..50643679,- | |||
|ontology_enrichment_celltype=CL:0000223!6.45e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002537;9.46e-27;5!CL:0002541;5.91e-20;3!CL:0000349;5.72e-19;19!CL:0000945;1.06e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,9.89e-27,5;CL:0002541,4.88e-20,3;CL:0000349,5.41e-19,19;CL:0000945,9.00e-10,24;CL:0000826,9.00e-10,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;1.07e-15;1!DOID:74;1.67e-08;2!DOID:4074;2.40e-08;2!DOID:4905;2.40e-08;2!DOID:3498;2.40e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.99e-16,1;DOID:74,1.61e-08,2;DOID:4074,2.48e-08,2;DOID:4905,2.48e-08,2;DOID:3498,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.01e-10!14;UBERON:0000158!3.01e-10!14;UBERON:0000478!9.48e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.39e-36;10!UBERON:0000158;6.39e-36;10!UBERON:0003124;5.91e-20;3!UBERON:0000920;5.91e-20;3!UBERON:0000305;2.58e-19;7!UBERON:0000478;4.99e-15;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.71e-26,14;UBERON:0000158,9.71e-26,14;UBERON:0000920,4.88e-20,3;UBERON:0000305,2.66e-19,7;UBERON:0004871,5.67e-17,8;UBERON:0000478,4.77e-15,24;UBERON:0003124,3.88e-09,7 | |||
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| ||
|short_description=p23@LIMA1 | |||
}} | }} |
Latest revision as of 18:32, 18 September 2015
Short description: | p23@LIMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_LIMA1_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000550592_5end |
EntrezGene: | LIMA1 |
HGNC: | 24636 |
UniProt: | F8VVQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 9.89e-27 | 5 |
chorionic membrane mesenchymal stem cell | 4.88e-20 | 3 |
extraembryonic cell | 5.41e-19 | 19 |
lymphocyte of B lineage | 9.00e-10 | 24 |
pro-B cell | 9.00e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.71e-26 | 14 |
membranous layer | 9.71e-26 | 14 |
egg chorion | 4.88e-20 | 3 |
amnion | 2.66e-19 | 7 |
somatic layer of lateral plate mesoderm | 5.67e-17 | 8 |
extraembryonic structure | 4.77e-15 | 24 |
chorion | 3.88e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.99e-16 | 1 |
hematopoietic system disease | 1.61e-08 | 2 |
pancreas adenocarcinoma | 2.48e-08 | 2 |
pancreatic carcinoma | 2.48e-08 | 2 |
pancreatic ductal adenocarcinoma | 2.48e-08 | 2 |