FFCP PHASE1:Hg19::chr4:103266068..103266091,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64116 | |EntrezGene=64116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20862 | |HGNC=20862 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0K1 | |UniProt=Q9C0K1 | ||
|association_with_transcript=204bp_to_ENST00000394833_5end | |association_with_transcript=204bp_to_ENST00000394833_5end | ||
|cluster_id=chr4:103266068..103266091,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_10_at_SLC39A8_5end | |description=CAGE_peak_10_at_SLC39A8_5end | ||
|id=chr4:103266068..103266091,- | |id=chr4:103266068..103266091,- | ||
|ontology_enrichment_celltype=CL:0000037!1.15e-14!172;CL:0000566!1.15e-14!172;CL:0000988!3.05e-14!182;CL:0002032!1.49e-13!165;CL:0000837!1.49e-13!165;CL:0000838!1.17e-08!52;CL:0000542!2.59e-08!53;CL:0000051!2.59e-08!53;CL:0002031!1.95e-07!124 | |ontology_enrichment_celltype=CL:0000037!1.15e-14!172;CL:0000566!1.15e-14!172;CL:0000988!3.05e-14!182;CL:0002032!1.49e-13!165;CL:0000837!1.49e-13!165;CL:0000838!1.17e-08!52;CL:0000542!2.59e-08!53;CL:0000051!2.59e-08!53;CL:0002031!1.95e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0002032;2.49e-07;1!CL:0000511;2.49e-07;1!CL:0002625;2.49e-07;1!CL:0000037;2.49e-07;1!CL:0001024;2.49e-07;1!CL:0000557;2.49e-07;1!CL:0000216;2.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.98e-09,168;CL:0002032,2.01e-08,161;CL:0000837,2.01e-08,161;CL:0000988,2.22e-08,177;CL:0000511,1.83e-07,1;CL:0002625,1.83e-07,1;CL:0000216,1.83e-07,1;CL:0001024,2.35e-07,1;CL:0000763,4.99e-07,108;CL:0000049,4.99e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.40e-13!51;DOID:0060083!2.40e-13!51;DOID:1240!1.79e-11!39;DOID:8692!4.76e-11!31;DOID:0050686!2.20e-08!137;DOID:1036!5.12e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.24e-12;8!DOID:8692;9.15e-09;31!DOID:8552;7.49e-08;1!DOID:4960;2.49e-07;1!DOID:0070004;2.49e-07;1!DOID:2355;2.49e-07;1!DOID:1240;9.48e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.29e-12,8;DOID:2531,3.76e-10,51;DOID:0060083,3.76e-10,51;DOID:8692,5.53e-09,31;DOID:1240,6.15e-09,39;DOID:8552,7.50e-08,1;DOID:2355,4.09e-07,1;DOID:4960,4.34e-07,1;DOID:0070004,4.34e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.10e-07;1!UBERON:0009842;1.10e-07;1!UBERON:0003704;1.10e-07;1!UBERON:0001171;1.10e-07;1!UBERON:0001172;1.10e-07;1!UBERON:0001136;2.49e-07;1!UBERON:0001343;2.49e-07;1!UBERON:0004910;2.49e-07;1!UBERON:0004813;2.49e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.10e-07,1;UBERON:0009842,1.10e-07,1;UBERON:0003704,1.10e-07,1;UBERON:0001171,1.10e-07,1;UBERON:0001172,1.10e-07,1;UBERON:0001136,1.83e-07,1;UBERON:0001343,1.83e-07,1;UBERON:0004910,1.83e-07,1;UBERON:0005154,1.83e-07,1;UBERON:0005295,1.83e-07,1;UBERON:0004813,1.83e-07,1;UBERON:0005297,1.83e-07,1;UBERON:0005294,1.83e-07,1;UBERON:0010141,1.83e-07,1;UBERON:0005891,1.83e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0.309632246632152,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,1.46800219667424,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.580418477257168,1.70215567407342,1.86846674698672,0,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,3.96513985737078,4.48406850385229,2.89722493252585,0.786839080455332,0.786021525498329,1.02800749499755,0,0,0,0,0,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0.444859689486181,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0,0,0.710331756132051,0,1.61285394579786,0.802320587350522,0.724122019413995,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.594524649154913,0,0.16798212819886,0,0,0,0,7.38994856843915,3.16974362447614,0.621984346622316,0.288239906833923,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.799783929456456,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.788123040807709,0.431255149719035,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0.647142602455851,0.960548020230999,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.877039506583738,0.522870902049801,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.876901770507525,0,0,0.608731130888112,0,0,0.143411352204052,0,0,0,0.422215270595328,0.658589785919804,0,0,0,1.34060455107157,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.142283686696828,0.159426272728822,0,0,1.69338866179106,0.973865820823666,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0.500547425135725,0,0.556812347790485,1.23087398947712,0.811367035427949,0.99921590399346,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0,0.369254416383208,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.615602068030377,2.27884111694002,0,0,0,0,0.0915975934018623,0.533034776018635,1.02193298195737,2.19772358953035,9.64027755020907,0.676786981851542,0.392125068635479,0.167821586975843,0.75901493089674,17.4830236878417,0,0,0,0.216388639742091,0,0.530745387020035,0,0.593042257361244,0.247127877893006,0.313265848516366,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54810130062536,1.24251839046515,1.47807822695777,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0.135904206073614,0.104602846312333,0.305994652908965,0,0,0.136905378891993,1.27746588066972,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,1.1007533168552,0,0,0,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0.105600336519406,158.8485826489,0,0,0,0,0,0,0,0,1.97022049798414,0.170388021785422,0,0.879313402068495,0,0.129282956361551,0,0.171086837884329,0,0.854299300541557,0,0.828478110694391,0.496166021811951,0.197611631897944,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.457680136793847,0.151230923763239,0.15543720058278,0,0.159296767163702,0.899606224327209,0.310525913752519,0,0,0.521745061811734,0.300515217994437,1.90402606084398,0,0.545545977607678,0.429642228169954,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0.59996218756479,0.426766918776564,1.03328987796489,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0.867479195013787,0,0,0,0.12845845019291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| ||
|short_description=p10@SLC39A8 | |short_description=p10@SLC39A8 | ||
}} | }} |
Latest revision as of 03:37, 20 September 2015
Short description: | p10@SLC39A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC39A8_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 204bp_to_ENST00000394833_5end |
EntrezGene: | SLC39A8 |
HGNC: | 20862 |
UniProt: | Q9C0K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.98e-09 | 168 |
hematopoietic oligopotent progenitor cell | 2.01e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-08 | 161 |
hematopoietic cell | 2.22e-08 | 177 |
androgen binding protein secreting cell | 1.83e-07 | 1 |
seminiferous tubule epithelial cell | 1.83e-07 | 1 |
Sertoli cell | 1.83e-07 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.35e-07 | 1 |
myeloid cell | 4.99e-07 | 108 |
common myeloid progenitor | 4.99e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.10e-07 | 1 |
acinus | 1.10e-07 | 1 |
intrahepatic bile duct | 1.10e-07 | 1 |
portal lobule | 1.10e-07 | 1 |
hepatic acinus | 1.10e-07 | 1 |
mesothelium | 1.83e-07 | 1 |
seminiferous tubule of testis | 1.83e-07 | 1 |
epithelium of male gonad | 1.83e-07 | 1 |
epithelial cord | 1.83e-07 | 1 |
sex cord | 1.83e-07 | 1 |
seminiferous tubule epithelium | 1.83e-07 | 1 |
testis sex cord | 1.83e-07 | 1 |
genital ridge | 1.83e-07 | 1 |
primitive sex cord of indifferent gonad | 1.83e-07 | 1 |
coelomic epithelium | 1.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.29e-12 | 8 |
hematologic cancer | 3.76e-10 | 51 |
immune system cancer | 3.76e-10 | 51 |
myeloid leukemia | 5.53e-09 | 31 |
leukemia | 6.15e-09 | 39 |
chronic myeloid leukemia | 7.50e-08 | 1 |
anemia | 4.09e-07 | 1 |
bone marrow cancer | 4.34e-07 | 1 |
myeloma | 4.34e-07 | 1 |