FFCP PHASE1:Hg19::chr3:88199099..88199154,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285237 | |EntrezGene=285237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28384 | |HGNC=28384 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFZ1 | |UniProt=E9PFZ1 | ||
|association_with_transcript=0bp_to_ENST00000486971_5end | |association_with_transcript=0bp_to_ENST00000486971_5end | ||
|cluster_id=chr3:88199099..88199154,+ | |||
|description=CAGE_peak_1_at_C3orf38_5end | |description=CAGE_peak_1_at_C3orf38_5end | ||
|id=chr3:88199099..88199154,+ | |id=chr3:88199099..88199154,+ | ||
|ontology_enrichment_celltype=CL:0000839!8.67e-25!70;CL:0002009!1.95e-24!65;CL:0000766!6.16e-24!76;CL:0000557!7.76e-24!71;CL:0002194!1.46e-23!63;CL:0000576!1.46e-23!63;CL:0000040!1.46e-23!63;CL:0000559!1.46e-23!63;CL:0002057!2.35e-19!42;CL:0000763!9.40e-19!112;CL:0000049!9.40e-19!112;CL:0000860!3.55e-16!45;CL:0000738!1.87e-07!140 | |ontology_enrichment_celltype=CL:0000839!8.67e-25!70;CL:0002009!1.95e-24!65;CL:0000766!6.16e-24!76;CL:0000557!7.76e-24!71;CL:0002194!1.46e-23!63;CL:0000576!1.46e-23!63;CL:0000040!1.46e-23!63;CL:0000559!1.46e-23!63;CL:0002057!2.35e-19!42;CL:0000763!9.40e-19!112;CL:0000049!9.40e-19!112;CL:0000860!3.55e-16!45;CL:0000738!1.87e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.98e-16;39!CL:0000234;3.98e-16;39!CL:0000860;6.22e-16;33!CL:0002057;6.22e-16;33!CL:0000576;1.32e-14;48!CL:0000766;4.70e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,8.56e-28,66;CL:0002009,1.38e-27,61;CL:0000557,1.01e-26,67;CL:0002194,1.05e-26,59;CL:0000576,1.05e-26,59;CL:0000040,1.05e-26,59;CL:0000559,1.05e-26,59;CL:0000766,1.10e-26,72;CL:0000473,1.45e-22,48;CL:0000234,1.45e-22,48;CL:0000763,1.74e-20,108;CL:0000049,1.74e-20,108;CL:0000860,2.35e-19,42;CL:0002057,2.35e-19,42;CL:0000738,3.04e-08,136;CL:0002031,1.77e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.47e-22!80;UBERON:0004765!4.68e-20!101;UBERON:0001434!4.68e-20!101;UBERON:0001474!2.64e-19!86;UBERON:0002390!1.99e-16!102;UBERON:0003061!1.99e-16!102;UBERON:0002193!9.83e-13!112;UBERON:0002204!2.32e-10!167;UBERON:0002405!6.21e-10!115;UBERON:0001017!8.37e-08!82;UBERON:0005743!1.32e-07!86;UBERON:0000062!2.23e-07!511;UBERON:0000073!3.66e-07!94;UBERON:0001016!3.66e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.90e-24,76;UBERON:0004765,2.10e-22,90;UBERON:0001434,2.52e-22,100;UBERON:0001474,1.92e-21,82;UBERON:0002390,4.10e-18,98;UBERON:0003061,4.10e-18,98;UBERON:0002405,5.20e-17,93;UBERON:0002193,4.70e-14,108;UBERON:0002204,1.21e-11,167;UBERON:0001017,1.39e-07,81;UBERON:0001016,4.13e-07,89 | |||
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7075229 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|short_description=p1@C3orf38 | |short_description=p1@C3orf38 | ||
}} | }} |
Latest revision as of 19:16, 19 September 2015
Short description: | p1@C3orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C3orf38_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000486971_5end |
EntrezGene: | C3orf38 |
HGNC: | 28384 |
UniProt: | E9PFZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 8.56e-28 | 66 |
macrophage dendritic cell progenitor | 1.38e-27 | 61 |
granulocyte monocyte progenitor cell | 1.01e-26 | 67 |
monopoietic cell | 1.05e-26 | 59 |
monocyte | 1.05e-26 | 59 |
monoblast | 1.05e-26 | 59 |
promonocyte | 1.05e-26 | 59 |
myeloid leukocyte | 1.10e-26 | 72 |
defensive cell | 1.45e-22 | 48 |
phagocyte | 1.45e-22 | 48 |
myeloid cell | 1.74e-20 | 108 |
common myeloid progenitor | 1.74e-20 | 108 |
classical monocyte | 2.35e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.35e-19 | 42 |
leukocyte | 3.04e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 1.77e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.90e-24 | 76 |
skeletal element | 2.10e-22 | 90 |
skeletal system | 2.52e-22 | 100 |
bone element | 1.92e-21 | 82 |
hematopoietic system | 4.10e-18 | 98 |
blood island | 4.10e-18 | 98 |
immune system | 5.20e-17 | 93 |
hemolymphoid system | 4.70e-14 | 108 |
musculoskeletal system | 1.21e-11 | 167 |
central nervous system | 1.39e-07 | 81 |
nervous system | 4.13e-07 | 89 |