FFCP PHASE1:Hg19::chr3:88199069..88199092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285237 | |EntrezGene=285237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28384 | |HGNC=28384 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFZ1 | |UniProt=E9PFZ1 | ||
|association_with_transcript=-44bp_to_ENST00000486971_5end | |association_with_transcript=-44bp_to_ENST00000486971_5end | ||
|cluster_id=chr3:88199069..88199092,+ | |||
|description=CAGE_peak_3_at_C3orf38_5end | |description=CAGE_peak_3_at_C3orf38_5end | ||
|id=chr3:88199069..88199092,+ | |id=chr3:88199069..88199092,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.79e-30!76;CL:0000839!1.83e-27!70;CL:0000557!2.39e-27!71;CL:0000763!3.28e-26!112;CL:0000049!3.28e-26!112;CL:0002194!3.81e-24!63;CL:0000576!3.81e-24!63;CL:0000040!3.81e-24!63;CL:0000559!3.81e-24!63;CL:0002009!3.96e-24!65;CL:0002057!2.85e-22!42;CL:0000860!2.03e-18!45;CL:0002032!1.10e-15!165;CL:0000837!1.10e-15!165;CL:0000738!1.76e-15!140;CL:0000037!4.25e-15!172;CL:0000566!4.25e-15!172;CL:0002031!5.12e-14!124;CL:0000988!2.27e-13!182;CL:0002087!2.18e-11!119;CL:0002320!4.83e-09!365;CL:0000134!5.92e-09!358;CL:0000048!3.49e-08!430;CL:0000723!1.93e-07!436 | |ontology_enrichment_celltype=CL:0000766!4.79e-30!76;CL:0000839!1.83e-27!70;CL:0000557!2.39e-27!71;CL:0000763!3.28e-26!112;CL:0000049!3.28e-26!112;CL:0002194!3.81e-24!63;CL:0000576!3.81e-24!63;CL:0000040!3.81e-24!63;CL:0000559!3.81e-24!63;CL:0002009!3.96e-24!65;CL:0002057!2.85e-22!42;CL:0000860!2.03e-18!45;CL:0002032!1.10e-15!165;CL:0000837!1.10e-15!165;CL:0000738!1.76e-15!140;CL:0000037!4.25e-15!172;CL:0000566!4.25e-15!172;CL:0002031!5.12e-14!124;CL:0000988!2.27e-13!182;CL:0002087!2.18e-11!119;CL:0002320!4.83e-09!365;CL:0000134!5.92e-09!358;CL:0000048!3.49e-08!430;CL:0000723!1.93e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.58e-18;39!CL:0000234;6.58e-18;39!CL:0000860;1.73e-17;33!CL:0002057;1.73e-17;33!CL:0000576;2.02e-16;48!CL:0000766;1.64e-14;69!CL:0000763;2.45e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.78e-33,72;CL:0000839,7.29e-31,66;CL:0000557,1.06e-30,67;CL:0000763,1.91e-28,108;CL:0000049,1.91e-28,108;CL:0002194,1.79e-27,59;CL:0000576,1.79e-27,59;CL:0000040,1.79e-27,59;CL:0000559,1.79e-27,59;CL:0002009,2.23e-27,61;CL:0000473,7.31e-26,48;CL:0000234,7.31e-26,48;CL:0000860,2.03e-22,42;CL:0002057,2.03e-22,42;CL:0000738,6.01e-17,136;CL:0002032,7.19e-17,161;CL:0000837,7.19e-17,161;CL:0000037,2.64e-16,168;CL:0002031,1.79e-15,120;CL:0000988,9.18e-15,177;CL:0002087,1.33e-12,115;CL:0002320,2.60e-10,361;CL:0000134,3.02e-10,354;CL:0000048,3.09e-09,427;CL:0000723,2.15e-08,433;CL:0000219,1.58e-07,386;CL:0000034,1.68e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.61e-17;42!CL:0000049;6.16e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.54e-26!80;UBERON:0001474!4.68e-23!86;UBERON:0004765!3.52e-22!101;UBERON:0001434!3.52e-22!101;UBERON:0002390!8.82e-22!102;UBERON:0003061!8.82e-22!102;UBERON:0002193!1.31e-18!112;UBERON:0002204!2.87e-17!167;UBERON:0002405!1.25e-12!115;UBERON:0002384!1.01e-08!375;UBERON:0001049!2.48e-08!57;UBERON:0005068!2.48e-08!57;UBERON:0006241!2.48e-08!57;UBERON:0007135!2.48e-08!57;UBERON:0007023!4.79e-08!115;UBERON:0002616!6.29e-08!59;UBERON:0003080!1.69e-07!42;UBERON:0003081!2.41e-07!216;UBERON:0002780!2.56e-07!41;UBERON:0001890!2.56e-07!41;UBERON:0006240!2.56e-07!41;UBERON:0001893!5.72e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.88e-29,76;UBERON:0004765,1.26e-26,90;UBERON:0001474,1.12e-25,82;UBERON:0001434,5.42e-25,100;UBERON:0002390,3.06e-24,98;UBERON:0003061,3.06e-24,98;UBERON:0002405,8.61e-23,93;UBERON:0002193,5.76e-21,108;UBERON:0002204,9.76e-19,167;UBERON:0003081,3.64e-10,203;UBERON:0002384,6.06e-10,371;UBERON:0001049,3.25e-08,56;UBERON:0005068,3.25e-08,56;UBERON:0006241,3.25e-08,56;UBERON:0007135,3.25e-08,56;UBERON:0007023,3.78e-08,114;UBERON:0000073,1.48e-07,53;UBERON:0002616,1.48e-07,53;UBERON:0002780,2.84e-07,41;UBERON:0001890,2.84e-07,41;UBERON:0003080,2.84e-07,41;UBERON:0006240,2.84e-07,41;UBERON:0001893,6.46e-07,34 | |||
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| ||
|short_description=p3@C3orf38 | |short_description=p3@C3orf38 | ||
}} | }} |
Latest revision as of 19:15, 19 September 2015
Short description: | p3@C3orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C3orf38_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_ENST00000486971_5end |
EntrezGene: | C3orf38 |
HGNC: | 28384 |
UniProt: | E9PFZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.78e-33 | 72 |
myeloid lineage restricted progenitor cell | 7.29e-31 | 66 |
granulocyte monocyte progenitor cell | 1.06e-30 | 67 |
myeloid cell | 1.91e-28 | 108 |
common myeloid progenitor | 1.91e-28 | 108 |
monopoietic cell | 1.79e-27 | 59 |
monocyte | 1.79e-27 | 59 |
monoblast | 1.79e-27 | 59 |
promonocyte | 1.79e-27 | 59 |
macrophage dendritic cell progenitor | 2.23e-27 | 61 |
defensive cell | 7.31e-26 | 48 |
phagocyte | 7.31e-26 | 48 |
classical monocyte | 2.03e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-22 | 42 |
leukocyte | 6.01e-17 | 136 |
hematopoietic oligopotent progenitor cell | 7.19e-17 | 161 |
hematopoietic multipotent progenitor cell | 7.19e-17 | 161 |
hematopoietic stem cell | 2.64e-16 | 168 |
hematopoietic lineage restricted progenitor cell | 1.79e-15 | 120 |
hematopoietic cell | 9.18e-15 | 177 |
nongranular leukocyte | 1.33e-12 | 115 |
connective tissue cell | 2.60e-10 | 361 |
mesenchymal cell | 3.02e-10 | 354 |
multi fate stem cell | 3.09e-09 | 427 |
somatic stem cell | 2.15e-08 | 433 |
motile cell | 1.58e-07 | 386 |
stem cell | 1.68e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.88e-29 | 76 |
skeletal element | 1.26e-26 | 90 |
bone element | 1.12e-25 | 82 |
skeletal system | 5.42e-25 | 100 |
hematopoietic system | 3.06e-24 | 98 |
blood island | 3.06e-24 | 98 |
immune system | 8.61e-23 | 93 |
hemolymphoid system | 5.76e-21 | 108 |
musculoskeletal system | 9.76e-19 | 167 |
lateral plate mesoderm | 3.64e-10 | 203 |
connective tissue | 6.06e-10 | 371 |
neural tube | 3.25e-08 | 56 |
neural rod | 3.25e-08 | 56 |
future spinal cord | 3.25e-08 | 56 |
neural keel | 3.25e-08 | 56 |
adult organism | 3.78e-08 | 114 |
regional part of nervous system | 1.48e-07 | 53 |
regional part of brain | 1.48e-07 | 53 |
regional part of forebrain | 2.84e-07 | 41 |
forebrain | 2.84e-07 | 41 |
anterior neural tube | 2.84e-07 | 41 |
future forebrain | 2.84e-07 | 41 |
telencephalon | 6.46e-07 | 34 |