FFCP PHASE1:Hg19::chr12:48499883..48499915,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:48499883..48499915,+
|short_description=p5@PFKM
|description=CAGE_peak_5_at_PFKM_5end
|association_with_transcript=0bp_to_ENST00000546755,ENST00000547581,...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5213 | |EntrezGene=5213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8877 | |HGNC=8877 | ||
|TSSclassifier=strong | |||
|UniProt=F8VNZ1,F8VTT5,F8VVE3 | |UniProt=F8VNZ1,F8VTT5,F8VVE3 | ||
|association_with_transcript=0bp_to_ENST00000546755,ENST00000547581,ENST00000549366_5end | |||
|cluster_id=chr12:48499883..48499915,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_PFKM_5end | |||
|id=chr12:48499883..48499915,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!9.64e-07!41;UBERON:0001890!9.64e-07!41;UBERON:0006240!9.64e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;6.59e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,1.33e-09,7;UBERON:0006222,1.33e-09,7;UBERON:0002780,2.64e-07,41;UBERON:0001890,2.64e-07,41;UBERON:0003080,2.64e-07,41;UBERON:0006240,2.64e-07,41 | |||
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| ||
|short_description=p5@PFKM | |||
}} | }} |
Latest revision as of 13:44, 18 September 2015
Short description: | p5@PFKM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PFKM_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000546755, ENST00000547581, ENST00000549366_5end |
EntrezGene: | PFKM |
HGNC: | 8877 |
UniProt: | F8VNZ1F8VTT5F8VVE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
diencephalon | 1.33e-09 | 7 |
future diencephalon | 1.33e-09 | 7 |
regional part of forebrain | 2.64e-07 | 41 |
forebrain | 2.64e-07 | 41 |
anterior neural tube | 2.64e-07 | 41 |
future forebrain | 2.64e-07 | 41 |