FFCP PHASE1:Hg19::chr1:14465017..14465026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:14465017..14465026,+ | |||
|coexpression_cluster_id=C585 | |||
|description=CAGE_peak_at_chr1:14465017..14465026,+ | |description=CAGE_peak_at_chr1:14465017..14465026,+ | ||
|id=chr1:14465017..14465026,+ | |id=chr1:14465017..14465026,+ | ||
|ontology_enrichment_celltype=CL:0002621!4.73e-47!3;CL:0002166!1.05e-21!3;CL:0002076!5.33e-09!43;CL:0002251!2.88e-07!21 | |ontology_enrichment_celltype=CL:0002621!4.73e-47!3;CL:0002166!1.05e-21!3;CL:0002076!5.33e-09!43;CL:0002251!2.88e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.52e-87;3!CL:0002166;2.62e-23;3!CL:0002251;2.76e-14;20!CL:0002076;1.30e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.52e-87,3;CL:0002166,2.62e-23,3;CL:0002251,2.76e-14,20;CL:0002076,2.17e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!4.73e-47!3;UBERON:0001828!3.94e-18!8;UBERON:0001708!1.53e-16!4;UBERON:0001704!1.53e-16!4;UBERON:0000166!4.15e-12!21;UBERON:0002090!2.36e-11!6;UBERON:0000161!4.84e-11!35;UBERON:0000165!3.77e-09!28;UBERON:0000930!3.77e-09!28 | |ontology_enrichment_uberon=UBERON:0001949!4.73e-47!3;UBERON:0001828!3.94e-18!8;UBERON:0001708!1.53e-16!4;UBERON:0001704!1.53e-16!4;UBERON:0000166!4.15e-12!21;UBERON:0002090!2.36e-11!6;UBERON:0000161!4.84e-11!35;UBERON:0000165!3.77e-09!28;UBERON:0000930!3.77e-09!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.52e-87;3!UBERON:0003929;2.18e-38;7!UBERON:0003350;9.08e-34;8!UBERON:0001828;9.08e-34;8!UBERON:0000486;5.74e-23;12!UBERON:0003729;2.66e-21;13!UBERON:0001708;7.35e-18;4!UBERON:0008895;7.35e-18;4!UBERON:0000161;5.66e-15;19!UBERON:0000166;5.66e-15;19!UBERON:0011159;1.40e-14;5!UBERON:0000344;2.76e-14;20!UBERON:0004807;4.26e-13;22!UBERON:0000165;1.54e-10;28!UBERON:0010371;6.52e-10;31!UBERON:0005911;5.80e-08;36!UBERON:0011137;2.32e-07;11!UBERON:0010323;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.52e-87,3;UBERON:0003350,9.08e-34,8;UBERON:0001828,9.08e-34,8;UBERON:0003729,2.66e-21,13;UBERON:0001708,7.35e-18,4;UBERON:0008895,7.35e-18,4;UBERON:0011159,1.40e-14,5;UBERON:0000344,2.76e-14,20;UBERON:0000166,4.26e-13,22;UBERON:0010188,2.19e-12,6;UBERON:0002539,2.19e-12,6;UBERON:0008816,2.19e-12,6;UBERON:0000033,1.15e-11,56;UBERON:0000153,1.22e-10,62;UBERON:0007811,1.22e-10,62;UBERON:0004807,1.54e-10,28;UBERON:0000165,3.24e-10,29;UBERON:0000930,3.24e-10,29;UBERON:0000161,1.92e-08,36;UBERON:0010323,2.32e-07,11;UBERON:0003102,4.88e-07,99 | |||
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|short_description=p@chr1:14465017..14465026,+ | |short_description=p@chr1:14465017..14465026,+ | ||
}} | }} |
Latest revision as of 20:40, 27 July 2015
Short description: | p@chr1:14465017..14465026, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:14465017..14465026, + |
Coexpression cluster: | C585_Mallassezderived_amniotic_Small_chorionic_nasal_Keratinocyte_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.52e-87 | 3 |
epithelial cell of Malassez | 2.62e-23 | 3 |
epithelial cell of alimentary canal | 2.76e-14 | 20 |
endo-epithelial cell | 2.17e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.52e-87 | 3 |
epithelium of mucosa | 9.08e-34 | 8 |
gingiva | 9.08e-34 | 8 |
mouth mucosa | 2.66e-21 | 13 |
jaw skeleton | 7.35e-18 | 4 |
splanchnocranium | 7.35e-18 | 4 |
primary subdivision of cranial skeletal system | 1.40e-14 | 5 |
mucosa | 2.76e-14 | 20 |
oral opening | 4.26e-13 | 22 |
protuberance | 2.19e-12 | 6 |
pharyngeal arch | 2.19e-12 | 6 |
embryonic head | 2.19e-12 | 6 |
head | 1.15e-11 | 56 |
anterior region of body | 1.22e-10 | 62 |
craniocervical region | 1.22e-10 | 62 |
respiratory system epithelium | 1.54e-10 | 28 |
mouth | 3.24e-10 | 29 |
stomodeum | 3.24e-10 | 29 |
orifice | 1.92e-08 | 36 |
cranial skeletal system | 2.32e-07 | 11 |
surface structure | 4.88e-07 | 99 |