FFCP PHASE1:Hg19::chr1:12679075..12679086,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:12679075..12679086,- | |||
|coexpression_cluster_id=C3854 | |||
|description=CAGE_peak_at_chr1:12679075..12679086,- | |description=CAGE_peak_at_chr1:12679075..12679086,- | ||
|id=chr1:12679075..12679086,- | |id=chr1:12679075..12679086,- | ||
|ontology_enrichment_celltype=CL:0000359!1.91e-09!32;CL:0000183!5.32e-09!59;CL:0000187!1.60e-08!54;CL:0000222!2.27e-08!119;CL:0000680!5.23e-08!57;CL:0000056!5.23e-08!57;CL:0000355!5.23e-08!57;CL:0000192!3.65e-07!42;CL:0000514!3.65e-07!42 | |ontology_enrichment_celltype=CL:0000359!1.91e-09!32;CL:0000183!5.32e-09!59;CL:0000187!1.60e-08!54;CL:0000222!2.27e-08!119;CL:0000680!5.23e-08!57;CL:0000056!5.23e-08!57;CL:0000355!5.23e-08!57;CL:0000192!3.65e-07!42;CL:0000514!3.65e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.50e-15;32!CL:0000077;1.58e-08;19!CL:0002594;1.61e-08;4!CL:0002589;3.68e-08;2!CL:0002593;3.68e-08;2!CL:0000192;5.66e-08;43!CL:1000449;5.91e-08;15!CL:0002595;4.15e-07;5!CL:1000497;6.13e-07;17!CL:0002518;6.13e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.23e-15,32;CL:0000222,1.25e-14,121;CL:0002321,4.05e-11,250;CL:0000187,5.14e-11,55;CL:0000192,6.85e-11,43;CL:0000514,6.85e-11,43;CL:0000680,2.87e-10,58;CL:0000056,2.87e-10,58;CL:0000355,2.87e-10,58;CL:0000393,1.35e-09,61;CL:0000211,1.35e-09,61;CL:0002594,1.31e-08,4;CL:0000077,1.45e-08,19;CL:0002593,4.93e-08,2;CL:1000449,6.23e-08,15;CL:0002589,8.35e-08,2;CL:0002595,4.73e-07,5;CL:1000497,6.41e-07,17;CL:0002518,6.41e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;5.66e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.42e-12!118;UBERON:0001637!9.53e-11!42;UBERON:0003509!9.53e-11!42;UBERON:0004572!9.53e-11!42;UBERON:0005256!3.17e-10!143;UBERON:0003064!1.60e-09!37;UBERON:0004573!5.92e-09!33;UBERON:0004571!5.92e-09!33;UBERON:0002100!8.03e-09!216;UBERON:0003103!2.14e-08!69;UBERON:0000490!6.69e-08!138;UBERON:0002385!8.65e-08!63;UBERON:0001015!8.65e-08!63;UBERON:0000383!8.65e-08!63;UBERON:0001008!8.86e-08!45;UBERON:0003104!1.08e-07!238;UBERON:0009142!1.08e-07!238;UBERON:0006554!2.51e-07!44;UBERON:0001134!3.09e-07!61;UBERON:0002036!3.09e-07!61;UBERON:0003082!3.09e-07!61;UBERON:0004111!3.72e-07!241;UBERON:0001981!4.58e-07!60;UBERON:0007500!4.58e-07!60;UBERON:0004537!4.58e-07!60;UBERON:0006965!4.58e-07!60;UBERON:0000477!6.10e-07!286;UBERON:0004872!6.94e-07!84;UBERON:0007625!6.94e-07!11;UBERON:0000481!7.39e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.61e-08;4!UBERON:0001529;3.68e-08;2!UBERON:0002456;3.68e-08;2!UBERON:0007204;3.68e-08;2!UBERON:0006555;5.91e-08;15!UBERON:0004819;5.91e-08;15!UBERON:0001285;5.91e-08;15!UBERON:0007684;5.91e-08;15!UBERON:0001255;8.58e-08;2!UBERON:0001556;8.58e-08;2!UBERON:0001637;2.19e-07;42!UBERON:0003509;2.19e-07;42!UBERON:0004572;2.19e-07;42!UBERON:0003834;4.15e-07;5!UBERON:0001533;4.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.43e-12,117;UBERON:0001637,3.22e-11,42;UBERON:0003509,3.22e-11,42;UBERON:0004572,3.22e-11,42;UBERON:0005256,1.33e-10,122;UBERON:0007503,2.36e-10,78;UBERON:0000486,1.84e-09,83;UBERON:0001134,2.19e-09,62;UBERON:0002036,2.19e-09,62;UBERON:0003082,2.19e-09,62;UBERON:0002100,2.60e-09,199;UBERON:0003104,2.65e-09,160;UBERON:0009142,2.65e-09,160;UBERON:0002385,5.47e-09,64;UBERON:0001015,5.47e-09,64;UBERON:0000383,5.47e-09,64;UBERON:0001310,1.31e-08,4;UBERON:0003103,2.59e-08,68;UBERON:0001255,3.57e-08,2;UBERON:0001556,3.57e-08,2;UBERON:0002456,4.93e-08,2;UBERON:0004211,6.23e-08,15;UBERON:0009773,6.23e-08,15;UBERON:0001231,6.23e-08,15;UBERON:0001285,6.23e-08,15;UBERON:0007684,6.23e-08,15;UBERON:0004208,6.23e-08,15;UBERON:0001529,8.35e-08,2;UBERON:0007204,8.35e-08,2;UBERON:0002329,8.89e-08,71;UBERON:0003059,8.89e-08,71;UBERON:0007282,8.89e-08,71;UBERON:0004290,8.89e-08,71;UBERON:0009618,8.89e-08,71;UBERON:0001009,1.20e-07,112;UBERON:0003077,1.26e-07,72;UBERON:0007285,1.26e-07,72;UBERON:0007524,1.78e-07,73;UBERON:0006555,2.15e-07,16;UBERON:0004819,2.15e-07,16;UBERON:0007500,3.45e-07,59;UBERON:0001981,3.45e-07,59;UBERON:0004537,3.45e-07,59;UBERON:0006965,3.45e-07,59;UBERON:0004872,3.50e-07,83;UBERON:0003834,4.73e-07,5;UBERON:0001533,4.73e-07,5;UBERON:0004573,6.00e-07,33;UBERON:0004571,6.00e-07,33 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,1.47440361900905,1.39560233594486,0.218441372130172,0,0,0,0,0,0.730310090387373,0.487932798790507,0.61560529038394,0.816002764977012,0.313454721478088,0.572471974262113,0,0.125542639594803,0,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,0,0,1.66198622559563,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0,0,1.35426486594342,0,0,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,3.19656404608826,0.361439152384566,0.50133791063589,0.434539556882471,0,0.486634870302636,1.03988298880475,1.10864698731282,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.529636723252875,0.860509862246441,0.354668382198357,0.560677600142307,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0.567160915800105,0,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0.37223371266318,0.168776332241266,0.584622030967192,0.252433774244115,0.184099797284599,0.646584227275248,0,0.10075209822764,0,0.193260853163297,0,0,0,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,0,1.96565443335525,0,0,0.245976877086227,0.857839051492628,0,0,0,0,0,0,2.88662684050547,0.579652024875384,0.821860859650752,0.288732895522148,0,0,0,0,0,0.468008530278475,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0.87192013766656,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,3.91871190177462,3.48613383440118,3.69900067373611,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0.500170521059677,0,1.03985430765404,0,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0.276242966807689,1.03333003348146,0.364182336013434,0.917870904715969,0.902399225814824,0.0770153371044148,2.35304930753057,0,1.05551628892876,1.13733384070897,0.170093705276516,0,0,0.812839312631559,4.01351819083883,0.509752546090077,0,1.56712328305525,0,0,0.769350375349168,0.656029291399411,0.325378394664303,0.206082023295445,0.640986253728404,0.660075999364704,0,0,0,0.290012154876366,0,0,0.413509717453592,0.537101224341368,0.145016693914229,0.0852266274161009,0.712256285173899,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0.31481234683064,1.3940745403212,0.924100740528266,1.06461206063404,0,2.03856641014312,1.00187420719394,0,0,0,0,0,0.636406495851874,1.56989728039846,0,0,0,1.41527737101321,0,0.421258456238981,0.48763373908959,2.92456187557541,1.05650146756755,0.136499911407986,0.565621727814851,2.26016233240486,2.75682671773062,0.66343897524122,0.876901770507525,0,0,2.23201414658974,0.30982349809975,1.12678241012897,0,0,1.78335525740625,0,1.05553817648832,2.30506425071931,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.879049075631364,0,0,0,0.47748896947538,0,0.307160702099232,0,0,4.22973079087042,0,0,0.597743964753209,0.276283915531148,0,1.02268682502155,0,0.622079175323615,0.179736702294654,0.179021174675609,0,1.479651084554,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0.23056390438806,0.179515288819544,0,0.957003479195758,0.183195186803725,1.06606955203727,0,0,0,0.225595660617181,0,0.167821586975843,0,0.635746315921515,0.210998064528027,0,0,0,0,0.530745387020035,0,0.296521128680622,0,0,0,0,0,0,0.586993856796269,0,0.394584402849391,0,0,0.252746318513952,0.150323419414493,0.207376382794494,0,0.992975867626496,1.2557316736289,0,0.569219092059585,0,0.347119476670262,0.195984794828755,0.261177619741208,0.34945333648406,0,0,0,0,0.484945082442097,0,0,0.274083849293502,0.397429223405979,0,0,0,0,0.19980960958213,0,0,0.514784993585894,0.14405479798815,0.621262677827163,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.599037001496973,1.28767814440971,1.56220020209311,0.604651252380536,0,0,0.0787831823072236,0.659326867049332,0.539228350833479,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.236417121897595,0.472091293214983,0,0,0,1.42939065274673,0,0,0,0,0.326587360109409,0,0.164185041498678,0,0.113312091520126,1.17241786942466,0,0,0.13223260174269,0.171086837884329,0,0.32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|short_description=p@chr1:12679075..12679086,- | |short_description=p@chr1:12679075..12679086,- | ||
}} | }} |
Latest revision as of 20:31, 27 July 2015
Short description: | p@chr1:12679075..12679086, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12679075..12679086, - |
Coexpression cluster: | C3854_anaplastic_Cardiac_Mesothelial_mesothelioma_mesenchymal_Smooth_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.23e-15 | 32 |
mesodermal cell | 1.25e-14 | 121 |
embryonic cell | 4.05e-11 | 250 |
muscle cell | 5.14e-11 | 55 |
smooth muscle cell | 6.85e-11 | 43 |
smooth muscle myoblast | 6.85e-11 | 43 |
muscle precursor cell | 2.87e-10 | 58 |
myoblast | 2.87e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.87e-10 | 58 |
electrically responsive cell | 1.35e-09 | 61 |
electrically active cell | 1.35e-09 | 61 |
smooth muscle cell of the umbilical artery | 1.31e-08 | 4 |
mesothelial cell | 1.45e-08 | 19 |
smooth muscle cell of the internal thoracic artery | 4.93e-08 | 2 |
epithelial cell of nephron | 6.23e-08 | 15 |
smooth muscle cell of the brachiocephalic vasculature | 8.35e-08 | 2 |
smooth muscle cell of the subclavian artery | 4.73e-07 | 5 |
kidney cell | 6.41e-07 | 17 |
kidney epithelial cell | 6.41e-07 | 17 |