FFCP PHASE1:Hg19::chr12:46123464..46123512,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:46123464..46123512,+
|short_description=p1@ARID2
|description=CAGE_peak_1_at_ARID2_5end
|association_with_transcript=0bp_to_ENST00000549153_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=196528 | |EntrezGene=196528 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18037 | |HGNC=18037 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENG3 | |UniProt=E7ENG3 | ||
|association_with_transcript=0bp_to_ENST00000549153_5end | |||
|cluster_id=chr12:46123464..46123512,+ | |||
|description=CAGE_peak_1_at_ARID2_5end | |||
|id=chr12:46123464..46123512,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.77e-28!172;CL:0000566!3.77e-28!172;CL:0002032!1.02e-24!165;CL:0000837!1.02e-24!165;CL:0000988!1.55e-24!182;CL:0000738!1.25e-21!140;CL:0002031!1.81e-16!124;CL:0000763!4.50e-15!112;CL:0000049!4.50e-15!112;CL:0002087!3.43e-14!119;CL:0000542!2.10e-09!53;CL:0000051!2.10e-09!53;CL:0000838!3.23e-09!52;CL:0000766!4.03e-08!76;CL:0000557!9.90e-08!71;CL:0000839!2.24e-07!70;CL:0000084!3.06e-07!25;CL:0000827!3.06e-07!25;CL:0000791!6.42e-07!18;CL:0000789!6.42e-07!18;CL:0002420!6.42e-07!18;CL:0002419!6.42e-07!18;CL:0000790!6.42e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.31e-07;25!CL:0000791;5.90e-07;18!CL:0000789;5.90e-07;18!CL:0002419;5.90e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.81e-28,168;CL:0000988,2.09e-25,177;CL:0002032,5.24e-25,161;CL:0000837,5.24e-25,161;CL:0000738,5.94e-22,136;CL:0002031,9.67e-17,120;CL:0000763,2.34e-15,108;CL:0000049,2.34e-15,108;CL:0002087,1.99e-14,115;CL:0000542,2.09e-09,53;CL:0000051,2.09e-09,53;CL:0000838,3.22e-09,52;CL:0000766,2.50e-08,72;CL:0000557,6.08e-08,67;CL:0000839,1.41e-07,66;CL:0000084,3.05e-07,25;CL:0000827,3.05e-07,25;CL:0000791,6.40e-07,18;CL:0000789,6.40e-07,18;CL:0002420,6.40e-07,18;CL:0002419,6.40e-07,18;CL:0000790,6.40e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;5.90e-07;18 | |||
|ontology_enrichment_disease=DOID:1240!5.76e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.74e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.09e-10!115;UBERON:0002390!3.89e-08!102;UBERON:0003061!3.89e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.84e-10,114;UBERON:0002390,2.82e-08,98;UBERON:0003061,2.82e-08,98 | |||
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| ||
|short_description=p1@ARID2 | |||
}} | }} |
Latest revision as of 10:11, 18 September 2015
Short description: | p1@ARID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARID2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000549153_5end |
EntrezGene: | ARID2 |
HGNC: | 18037 |
UniProt: | E7ENG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.81e-28 | 168 |
hematopoietic cell | 2.09e-25 | 177 |
hematopoietic oligopotent progenitor cell | 5.24e-25 | 161 |
hematopoietic multipotent progenitor cell | 5.24e-25 | 161 |
leukocyte | 5.94e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 9.67e-17 | 120 |
myeloid cell | 2.34e-15 | 108 |
common myeloid progenitor | 2.34e-15 | 108 |
nongranular leukocyte | 1.99e-14 | 115 |
lymphocyte | 2.09e-09 | 53 |
common lymphoid progenitor | 2.09e-09 | 53 |
lymphoid lineage restricted progenitor cell | 3.22e-09 | 52 |
myeloid leukocyte | 2.50e-08 | 72 |
granulocyte monocyte progenitor cell | 6.08e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.41e-07 | 66 |
T cell | 3.05e-07 | 25 |
pro-T cell | 3.05e-07 | 25 |
mature alpha-beta T cell | 6.40e-07 | 18 |
alpha-beta T cell | 6.40e-07 | 18 |
immature T cell | 6.40e-07 | 18 |
mature T cell | 6.40e-07 | 18 |
immature alpha-beta T cell | 6.40e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.84e-10 | 114 |
hematopoietic system | 2.82e-08 | 98 |
blood island | 2.82e-08 | 98 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.74e-07 | 39 |